Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2357 269 3e-67
>seq2357
Length=5036361
Score = 269 bits (298), Expect = 3e-67
Identities = 1026/1597 (64%), Gaps = 32/1597 (2%)
Strand=Plus/Minus
Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627
|||||| || |||| ||||| || || ||||| ||||| || ||||| || ||
Sbjct 3896915 TTCATCCTCTGCTTTGTACTTCTCTGCCTCTTGCACCATACGGTCGATGTCGTCCTTGCT 3896856
Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687
| | ||||| || || || || || ||||| | || |||| | ||| || |
Sbjct 3896855 GAGGCGACCCTTGTCGTTGGTGATGGTGATCTTGTTCTCCTTCCCCGTGCTCTTGTCCAC 3896796
Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747
|||||| || |||| ||||| || ||||| | || || | || | || |||||
Sbjct 3896795 AGCACTGACGTTCAGGATACCGTTGGCATCGATGTCAAAAGTGACCTCGATCTGTGGGAC 3896736
Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807
|||| ||||| | || || || |||| ||||| | || || ||| |||||||| |
Sbjct 3896735 TCCCCGGGGTGCTGGGGGGATGCCTGTTAGGTCAAACTTGCCCAGCAAATTGTTATCCCT 3896676
Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGT-TGATTATCTTGTG 6866
| | | | |||||||| || || | | || || | | || || |||
Sbjct 3896675 TGTCATAGCCCTCTCACCTTCRTACACCTGGACCAGGAC-GCTGCTCTGGTTGTCTGAGT 3896617
Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926
|| | |||| | || || || | || || || || || | | || | | ||
Sbjct 3896616 AGGTGGTGAAGGTCTGAGTTTGTTTGGTGGGGATGGTGGTGTTGCGCTTGATGAGAGCGG 3896557
Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986
|||| | || || || |||| || || |||||||| || || ||||| || | ||
Sbjct 3896556 TCATCACTCCTCCAGCCGTCTCGATGCCCAGGGACAGAGGGGTGACATCCAACAGCAGCA 3896497
Query 6987 GGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046
| || || || || | || ||| | | ||| || ||||| || | || || |
Sbjct 3896496 GATCCTGCACGTTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGTACGGCAGCGCCAT 3896437
Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCG 7106
| || || |||||||| || || || | || || || |||||||| || || |||||
Sbjct 3896436 AAGCCACAGCCTCATCAGGATTGATGCTCTTGTTGAGCTCTTTACCATTGAAGAAATCCT 3896377
Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA 7166
|| || | || || || ||||| || || || ||||| |||| || || || | |
Sbjct 3896376 GTAGCAGCTTCTGGATCTTGGGGATGCGGGTAGAGCCACCCACCAGCACAATCTCCTGGA 3896317
Query 7167 CTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTAC 7226
| || |||| ||| | ||| || || | || || || || |||| ||
Sbjct 3896316 TCTGGCCCTTGTCGAGCTTGGCGTCACGCAGAGCCTTCTCCACCGGCTCCAGGGTGCCAC 3896257
Query 7227 GGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAA 7286
|||| | ||| | || ||||||||||| ||||| || ||||| || ||||| ||||
Sbjct 3896256 GGAAGAGGTCGGCATTGAGCTCCTCAAAACGGGCACGMGTGATGGAGGTGTAGAAGTCAA 3896197
Query 7287 CGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA---TAACGTTC 7343
||| || | | || ||||| |||||| | | || ||| || || | || |
Sbjct 3896196 TGCCCTCAAAGAGAGAGTCAATCTCAATGCTGGCCTG---CGTGGAGGAGCTGAGGGTGC 3896140
Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403
|||| || | |||||| ||||| || | || | | || ||| ||| |||| || |
Sbjct 3896139 GCTTCGCCCTCTCACAAGCCGTGCGCAGCCGCCTCACCGCTCGCTTGTTGCCGGCGATGT 3896080
Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463
| ||| || || || || || ||||| ||||| | | | || || |
Sbjct 3896079 CACGCTTGTGCTTGCGCTTGAATTCTTCCACAAAGTGGTTCACCATGCGGTTGTCAAAGT 3896020
Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523
| || ||||||| ||| || || || || || | || || || || || || | || |
Sbjct 3896019 CCTCCCCACCCAGGTGGGTGTCACCAGCTGTGGACTTTACCTCGAAAATCCCATCCTCGA 3895960
Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583
|| | | | || ||||| || || || || ||||||||||| ||||| |||||| | |
Sbjct 3895959 TGGTAAGGATGGAGACATCGAAAGTGCCCCCTCCCAGGTCAAAGATGAGCACGTTCTTCT 3895900
Query 7584 CGTC------GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637
| | | | ||||| || || || || || ||||| || || || || || |
Sbjct 3895899 CTCCAGCCCGGGTTCCTTTCTTGTCCAGGCCATAGGCAATAGCAGCTGCAGTGGGCTCGT 3895840
Query 7638 TAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
| || ||||| | ||| || ||||| | || || | ||||| || || || || ||
Sbjct 3895839 TGATGATACGCATCACA-TTGAGGCCGGTGATGGTGCCGGCATCCTTGGTGGCCTGGCGC 3895781
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || || || ||||| ||||| ||||| | ||| || | | || || || |||
Sbjct 3895780 TGGGAGTCATTGAAGTACGCCGGCACCGTGATGACAGCATTCTGCACCTTGCACCCCAGA 3895721
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || || || || ||||| ||||| || ||||| || ||||| || | | |
Sbjct 3895720 TAGGCCTCAGCAATCTCCTTCATCTTGGTGAGCACCATGGAGCTGATCTCCTCTG-GGAA 3895662
Query 7817 AACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875
| || ||| | || || || | || || | | | |||| || || ||||
Sbjct 3895661 GAAAGTCTTCATCTCCCCCTTGTACTCCACCTGCACCTTGGGCTT----GC--CACCCTC 3895608
Query 7876 GATAACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932
| ||| | | | ||| | ||||| || || ||| |||| | ||||
Sbjct 3895607 ATTCACCACACGGAAAGGCCAGTGCTTCATGTCTGACTGCACCGTGGGGTCATCATACTT 3895548
Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992
| ||||| || ||||| |||||||| | ||||| |||||||||| ||| |||||
Sbjct 3895547 GCGGCCGATGAGGCGCTTGGCATCAAAGATGGTGTTGGTGGGGTTCATCGCTACCTGGTT 3895488
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-G 8051
||| || ||||||||||| || || || || || || ||||| || || | |||| |
Sbjct 3895487 CTTGGCAGCGTCCCCGATGAGCCGCTCCGTA---TCGGTGAACGCCACATA-GCTGGGTG 3895432
Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111
| || || || || |||||||| || || || || || | ||| || |||| || |
Sbjct 3895431 TGGTGCGGTTACCCTGGTCGTTGGCGATGATCTCCACTTTGCCGTGCTGGAAGACACCCA 3895372
Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148
|||| || ||||| || || | || || ||||| ||
Sbjct 3895371 CGCAGGAGTACGTGGTGCCCAGGTCGATGCCGATCGC 3895335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635109514443720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |