Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2357 269 3e-67 >seq2357 Length=5036361 Score = 269 bits (298), Expect = 3e-67 Identities = 1026/1597 (64%), Gaps = 32/1597 (2%) Strand=Plus/Minus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| ||||| || || ||||| ||||| || ||||| || || Sbjct 3896915 TTCATCCTCTGCTTTGTACTTCTCTGCCTCTTGCACCATACGGTCGATGTCGTCCTTGCT 3896856 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 | | ||||| || || || || || ||||| | || |||| | ||| || | Sbjct 3896855 GAGGCGACCCTTGTCGTTGGTGATGGTGATCTTGTTCTCCTTCCCCGTGCTCTTGTCCAC 3896796 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 |||||| || |||| ||||| || ||||| | || || | || | || ||||| Sbjct 3896795 AGCACTGACGTTCAGGATACCGTTGGCATCGATGTCAAAAGTGACCTCGATCTGTGGGAC 3896736 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 |||| ||||| | || || || |||| ||||| | || || ||| |||||||| | Sbjct 3896735 TCCCCGGGGTGCTGGGGGGATGCCTGTTAGGTCAAACTTGCCCAGCAAATTGTTATCCCT 3896676 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGT-TGATTATCTTGTG 6866 | | | | |||||||| || || | | || || | | || || ||| Sbjct 3896675 TGTCATAGCCCTCTCACCTTCRTACACCTGGACCAGGAC-GCTGCTCTGGTTGTCTGAGT 3896617 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || | |||| | || || || | || || || || || | | || | | || Sbjct 3896616 AGGTGGTGAAGGTCTGAGTTTGTTTGGTGGGGATGGTGGTGTTGCGCTTGATGAGAGCGG 3896557 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||| | || || || |||| || || |||||||| || || ||||| || | || Sbjct 3896556 TCATCACTCCTCCAGCCGTCTCGATGCCCAGGGACAGAGGGGTGACATCCAACAGCAGCA 3896497 Query 6987 GGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 | || || || || | || ||| | | ||| || ||||| || | || || | Sbjct 3896496 GATCCTGCACGTTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGTACGGCAGCGCCAT 3896437 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCG 7106 | || || |||||||| || || || | || || || |||||||| || || ||||| Sbjct 3896436 AAGCCACAGCCTCATCAGGATTGATGCTCTTGTTGAGCTCTTTACCATTGAAGAAATCCT 3896377 Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA 7166 || || | || || || ||||| || || || ||||| |||| || || || | | Sbjct 3896376 GTAGCAGCTTCTGGATCTTGGGGATGCGGGTAGAGCCACCCACCAGCACAATCTCCTGGA 3896317 Query 7167 CTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTAC 7226 | || |||| ||| | ||| || || | || || || || |||| || Sbjct 3896316 TCTGGCCCTTGTCGAGCTTGGCGTCACGCAGAGCCTTCTCCACCGGCTCCAGGGTGCCAC 3896257 Query 7227 GGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAA 7286 |||| | ||| | || ||||||||||| ||||| || ||||| || ||||| |||| Sbjct 3896256 GGAAGAGGTCGGCATTGAGCTCCTCAAAACGGGCACGMGTGATGGAGGTGTAGAAGTCAA 3896197 Query 7287 CGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA---TAACGTTC 7343 ||| || | | || ||||| |||||| | | || ||| || || | || | Sbjct 3896196 TGCCCTCAAAGAGAGAGTCAATCTCAATGCTGGCCTG---CGTGGAGGAGCTGAGGGTGC 3896140 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 |||| || | |||||| ||||| || | || | | || ||| ||| |||| || | Sbjct 3896139 GCTTCGCCCTCTCACAAGCCGTGCGCAGCCGCCTCACCGCTCGCTTGTTGCCGGCGATGT 3896080 Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 | ||| || || || || || ||||| ||||| | | | || || | Sbjct 3896079 CACGCTTGTGCTTGCGCTTGAATTCTTCCACAAAGTGGTTCACCATGCGGTTGTCAAAGT 3896020 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 | || ||||||| ||| || || || || || | || || || || || || | || | Sbjct 3896019 CCTCCCCACCCAGGTGGGTGTCACCAGCTGTGGACTTTACCTCGAAAATCCCATCCTCGA 3895960 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 || | | | || ||||| || || || || ||||||||||| ||||| |||||| | | Sbjct 3895959 TGGTAAGGATGGAGACATCGAAAGTGCCCCCTCCCAGGTCAAAGATGAGCACGTTCTTCT 3895900 Query 7584 CGTC------GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | | | | ||||| || || || || || ||||| || || || || || | Sbjct 3895899 CTCCAGCCCGGGTTCCTTTCTTGTCCAGGCCATAGGCAATAGCAGCTGCAGTGGGCTCGT 3895840 Query 7638 TAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 | || ||||| | ||| || ||||| | || || | ||||| || || || || || Sbjct 3895839 TGATGATACGCATCACA-TTGAGGCCGGTGATGGTGCCGGCATCCTTGGTGGCCTGGCGC 3895781 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || || || ||||| ||||| ||||| | ||| || | | || || || ||| Sbjct 3895780 TGGGAGTCATTGAAGTACGCCGGCACCGTGATGACAGCATTCTGCACCTTGCACCCCAGA 3895721 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || || || ||||| ||||| || ||||| || ||||| || | | | Sbjct 3895720 TAGGCCTCAGCAATCTCCTTCATCTTGGTGAGCACCATGGAGCTGATCTCCTCTG-GGAA 3895662 Query 7817 AACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 | || ||| | || || || | || || | | | |||| || || |||| Sbjct 3895661 GAAAGTCTTCATCTCCCCCTTGTACTCCACCTGCACCTTGGGCTT----GC--CACCCTC 3895608 Query 7876 GATAACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 | ||| | | | ||| | ||||| || || ||| |||| | |||| Sbjct 3895607 ATTCACCACACGGAAAGGCCAGTGCTTCATGTCTGACTGCACCGTGGGGTCATCATACTT 3895548 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 | ||||| || ||||| |||||||| | ||||| |||||||||| ||| ||||| Sbjct 3895547 GCGGCCGATGAGGCGCTTGGCATCAAAGATGGTGTTGGTGGGGTTCATCGCTACCTGGTT 3895488 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-G 8051 ||| || ||||||||||| || || || || || || ||||| || || | |||| | Sbjct 3895487 CTTGGCAGCGTCCCCGATGAGCCGCTCCGTA---TCGGTGAACGCCACATA-GCTGGGTG 3895432 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | || || || || |||||||| || || || || || | ||| || |||| || | Sbjct 3895431 TGGTGCGGTTACCCTGGTCGTTGGCGATGATCTCCACTTTGCCGTGCTGGAAGACACCCA 3895372 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||| || ||||| || || | || || ||||| || Sbjct 3895371 CGCAGGAGTACGTGGTGCCCAGGTCGATGCCGATCGC 3895335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635109514443720