Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 145 2e-29
>seq2502
Length=4400873
Score = 145 bits (160), Expect = 2e-29
Identities = 166/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || || | ||| |||||||| ||||| || || ||||| |||| || ||
Sbjct 928204 CTGAGGCGCAGCACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTA 928145
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| ||||| || |||||||| || ||||| || || | || ||||| ||||| ||||||
Sbjct 928144 CGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCT 928085
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099
|| |||||||| || || |||||| |||||||||||||| ||||| ||||||
Sbjct 928084 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGG 928025
Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| | ||||| || |||| || || ||||| | |||||||
Sbjct 928024 GTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATTT 927982
Score = 107 bits (118), Expect = 4e-18
Identities = 154/216 (71%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| |||||||| ||||| ||||| || || || ||||| || | || || | |||||
Sbjct 928792 CAAGACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATC 928733
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| ||||| || || || ||||| || | || ||||| ||||| |||||||| || ||
Sbjct 928732 CTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATC 928673
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAAC 195104
|| || || ||||| || ||||||||||| ||| || ||||| || || |
Sbjct 928672 CTGGATCTTGGCTTTGACATTTTCAATGGTGTC---ACTGGGCTCGACTTCCAGAGTGAT 928616
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| || |||| || || || || | |||||
Sbjct 928615 TGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 928580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109439906721611
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |