Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 105 4e-18
>seq2502
Length=4400873
Score = 105 bits (116), Expect = 4e-18
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| ||||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 928192 ACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCC 928133
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || | |||||||| | || | || ||||||||
Sbjct 928132 AGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGG 928073
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||| ||||| || || || | || | || ||| || || | ||| ||||| |
Sbjct 928072 ATCTTGGCCTTGAC--ATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTCT 928015
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
| ||||| || ||||| || ||||||||||| ||
Sbjct 928014 TGCCCGTCAGGGTCTTGACGAAGATCTGCATTTT 927981
Score = 102 bits (112), Expect = 5e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| | || |||| ||||||||||| || |||||
Sbjct 928770 TCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGTTTCCCAGCAAAG 928711
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | || ||||| || ||||| |||||| |
Sbjct 928710 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTTTGACATTT 928651
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | |||| || ||| || || | || || || || ||||| || ||||| |||
Sbjct 928650 TCAATGGTGTCACTGGGCTCGACTTCCAGAGTGATTGTCTTGCCCGTCAGGGTCTTGACA 928591
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 928590 AAGATCTGCAT 928580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324621995667624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |