Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2350 102 2e-16 >seq2350 Length=253660 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078 || |||| || || |||| ||||||||| || |||||||| || || || || || Sbjct 175560 CTGGTTGGTTTCCACTCTCTTCATGAAGAGATCAGGGATCCAGAGTGCAAAGAACAGGTC 175501 Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138 ||||| |||||||| || || |||| ||| ||| |||| |||||||| ||||| Sbjct 175500 TCTGGCTCGCTGCTCTTCTTTCCCTGTGTTCTTCTTCAAGTCCAGGAACTCAAAGATGTC 175441 Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||||||||||||| |||| ||| | ||| || |||| || Sbjct 175440 CAAGTGCCACGGCTCCAGGTAGATGGCAAAAGCCCCAGGTCTCT 175397 Score = 102 bits (112), Expect = 2e-16 Identities = 110/145 (76%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGT 221774 |||| | ||||| ||||||| |||||| |||| |||| | |||||| || || |||| Sbjct 176761 CCAGCTCCCACAC--CCACCTCCTCCTTGCTGGTGTACTCCACGATCTCCGTGCACAGGT 176704 Query 221775 TGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGT 221834 |||||||||||||||| ||||||| | || || ||| | ||| | |||||||| Sbjct 176703 TGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGAGTCCTTGT 176644 Query 221835 AGAGCATAAAGGGACCGCCAGTCTC 221859 ||||||| |||| ||||||||| Sbjct 176643 AGAGCATGTAGGGGGTGCCAGTCTC 176619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928810746227520