Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2753 107 6e-18 >seq2753 Length=34300 Score = 107 bits (118), Expect = 6e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 ||||| || || || || || || || | || || ||||| || |||||||| | |||| Sbjct 9614 GTTTTCACGGCGGTGTCGATGAGCCCCTCGCGCCCGCCCATGGCGTGGAAGAAGAACTCT 9555 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 ||| ||||| | | ||||| |||| ||||| || || |||||| | | Sbjct 9554 GTCGGGGTSAGCCCGGCCAGGTAGGAGTTCTCCACGAAGCCGCGGCTCTCGGGGCCGTAG 9495 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||| | ||||| ||||||||||||| || ||||| | ||||| ||||| || Sbjct 9494 TCGTCCTTGATGAAGTGGGGCAGGGTCCTGTGCTTGAAGCCGAAGGGGATTCGCTTCCCC 9435 Query 302800 TCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCG 302836 || ||||||||||| |||| || |||| ||||| Sbjct 9434 TCCACGTTCTGCTGCCCCACCACCGCGATCACCTGCG 9398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471762290474421