Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1180 219 7e-51
seq1439 174 2e-37
seq2307 138 2e-26
seq2912 109 9e-18
seq2391 107 3e-17
seq2350 105 1e-16
seq2753 87.8 3e-11
seq847 86.0 1e-10
>seq1180
Length=1499208
Score = 219 bits (242), Expect = 7e-51
Identities = 202/256 (79%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 1474769 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCTCCGGGCA 1474710
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| ||| ||||||||| |
Sbjct 1474709 GCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 1474650
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 1474649 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 1474590
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | |||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 1474589 TGATGCYCATGGCTTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 1474530
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 1474529 ACACGTAGATCGAGTA 1474514
Score = 125 bits (138), Expect = 1e-22
Identities = 123/159 (77%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626
||| ||| ||||||||| | |||||||||| |||||| | ||||||| ||||
Sbjct 1470615 GATGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAA 1470674
Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686
||||||||||| || ||||||||||| ||| | ||| ||||||||| ||||||
Sbjct 1470675 GATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGG 1470734
Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAGTA 1485725
|||||||||||| ||||||||||| || || ||||||
Sbjct 1470735 GTGCACCTGCTTCAGCACCTTGTACACGTAGATCGAGTA 1470773
Score = 118 bits (130), Expect = 2e-20
Identities = 103/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 1485827 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCTCCGGGCA 1485886
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| ||| ||||||||| |
Sbjct 1485887 GCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 1485946
Query 1485590 GCGCCAGG 1485597
||||||||
Sbjct 1485947 GCGCCAGG 1485954
>seq1439
Length=7134548
Score = 174 bits (192), Expect = 2e-37
Identities = 192/256 (75%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || || | |
Sbjct 5622278 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCTCCCGGGA 5622337
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| ||||||||||| |||| ||| ||| ||||||||
Sbjct 5622338 GCAGCAGGCGCACGGCTGTCTGGATCTCCCGGGATGTGATGGTGGAACGCTTGTTGTAAT 5622397
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||||||| ||| || | ||||| || | ||||| ||||| || |||||||
Sbjct 5622398 GGGCCAGGCGGGAGGCTTCTCCAGCAATGCGCTCAAAGATGTCATTGACGAAGGAGTTCA 5622457
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||||| ||| || || |||||||| ||||||||||
Sbjct 5622458 TGATGCCCATGGCCTTGGAGGAGATGCCCGTGTCAGGATGGACCTGCTTCAGCACCTTGT 5622517
Query 1485710 AAACAAAGGACGAGTA 1485725
| ||| || |||||
Sbjct 5622518 AGACATAGATGGAGTA 5622533
>seq2307
Length=329114
Score = 138 bits (152), Expect = 2e-26
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| || ||| |||
Sbjct 201472 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCCCCGGGCA 201531
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || | ||| ||||| | ||| ||| || ||| ||| || | | | || |
Sbjct 201532 GCAGGAGCCTGGTGGCCGTCTGCACCTCACGGCTGGTGATGGTGGCACGGTGGCT-GTAC 201590
Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
| |||||||| |||||| | | | | ||| || | |||||| |||||||| ||||||
Sbjct 201591 TGGGCCAGGCGCGAGGCCTCCGAGGCCAGGCGCTCAAACATGTCATTGACAAAGGAGTTC 201650
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1485696
||||| ||| | ||| ||||||| | | ||| ||||||||||||
Sbjct 201651 ATGATGCTCATGGCCTTGGAGGAGATGGCGAGGTCTGGGTGCACCTGC 201698
>seq2912
Length=3111161
Score = 109 bits (120), Expect = 9e-18
Identities = 92/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362
|||||||| || ||||| ||||||||||||||||| |||||||||| ||| || |||
Sbjct 2000889 ACCTCCTCCGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGG 2000948
Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
|| |||||||||| | || ||||| ||||||||| || |||||||||||
Sbjct 2000949 TACTGGATGGGGAAGATGACGAAGCGGCGGGGGTTCTCCCGCAGCAGCGGCTC 2001001
>seq2391
Length=4963937
Score = 107 bits (118), Expect = 3e-17
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663
|||||| | ||||||| |||| ||||||||||| || ||||||||||| ||| |
Sbjct 4958448 GCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCC 4958507
Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAG 1485723
||| ||||||||| |||||||||||||||||| ||||||||||| || || ||||
Sbjct 4958508 TTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGTACACGTAGATCGAG 4958567
Query 1485724 TA 1485725
||
Sbjct 4958568 TA 4958569
Score = 89.7 bits (98), Expect = 8e-12
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 4894505 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCTCCGGGCA 4894446
Query 1485530 TGATCAGGCGCACGGCGGTCTG 1485551
| ||| |||||||| |||||
Sbjct 4894445 GCAGCAGCCGCACGGCCGTCTG 4894424
Score = 89.7 bits (98), Expect = 8e-12
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 4907049 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCTCCGGGCA 4907108
Query 1485530 TGATCAGGCGCACGGCGGTCTG 1485551
| ||| |||||||| |||||
Sbjct 4907109 GCAGCAGCCGCACGGCCGTCTG 4907130
>seq2350
Length=253660
Score = 105 bits (116), Expect = 1e-16
Identities = 85/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 2073650 CGGCAAAGCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGT 2073709
|||| | ||||||||||||||| | |||||||||||| || |||| ||||| || ||||
Sbjct 174157 CGGCGAGGCCGATGCCGCCGGCAGACTTGGAGATGAGGGCACACTGCTTCAGGGTGTCGT 174098
Query 2073710 AGATGCCCTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCA 2073752
||||||||||||| |||| |||||||| || ||| |||||
Sbjct 174097 AGATGCCCTCGATGCTGTCGTCCTTCATGCACAGCAGGAAGCA 174055
Score = 96.9 bits (106), Expect = 5e-14
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 2071579 ACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638
|||| ||| |||||||||||| || | ||||||||||||||||||||||||| ||
Sbjct 176722 ACGATCTCCGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTC 176663
Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698
|||| || |||||||| ||||||||||| | || ||||| |||| | | || |
Sbjct 176662 CTGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCCAGTCTCAGTCTGGGACTCGATG 176603
Query 2071699 ATGGCCGACCA 2071709
||||| ||||
Sbjct 176602 ATGGCGTACCA 176592
>seq2753
Length=34300
Score = 87.8 bits (96), Expect = 3e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081
||||||||||||||||| ||| ||||| ||| | ||| || | | || ||| |
Sbjct 9502 CCCGAGAGCCGCGGCTTCGTGGAGAACTCCTACCTGGCCGGGCTSACCCCGACAGAGTTC 9561
Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141
|| | ||| || |||||||||||||| ||| ||||||| ||||| || || ||||||
Sbjct 9562 TTCTTCCACGCCATGGGCGGGCGCGAGGGGCTCATCGACACCGCCGTGAAAACCGCCGAG 9621
Query 431142 ACGGG 431146
|||||
Sbjct 9622 ACGGG 9626
>seq847
Length=1744206
Score = 86.0 bits (94), Expect = 1e-10
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 2411714 GCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGA 2411773
|||||||||| |||| || || |||| ||| ||||| || || || ||| || |
Sbjct 1472582 GCTGGTAATCAGTGCCCCGGACGAATTTGAGCTTCTCCAGGGGCACCCCGATGCTCTCCA 1472523
Query 2411774 GCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTGCTCGACGAGGTCCCACGGCG 2411833
||||||| |||||| || |||||| | ||| || |||| | || ||||| || |
Sbjct 1472522 GCATGGCTTTGATGACATGCTCGTAGTAACGGGTGCGCAGCTCCAGCAGCTCCCAGGGAG 1472463
Query 2411834 TCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACC 2411883
||| ||||| |||| ||| || | ||| ||||||||||| |||||
Sbjct 1472462 CCTTCATGTTGTCCAGGTAGGCATGGAGGTCAGCAAAGAGGATTGTCACC 1472413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915934403412587
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