Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq2502 86.0 5e-12 >seq2502 Length=4400873 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || | || ||||| || || || | ||| ||| | | Sbjct 928580 ATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACAATCACTCTGGAAGTCGAGCCCAGT 928639 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || ||| ||||| ||||| |||||| | || || ||| Sbjct 928640 GACACCATTGAAAATGTCAAAGCCAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 928699 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || |||||||||||||| | | || || | ||||||||| Sbjct 928700 CAGAGGCTGATCTTTGCTGGGAAACAGCTGGAGGATGGCCGTACCCTGTCTGACTACAAC 928759 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785 || || |||||||| || ||||| | || ||| | |||| || || || Sbjct 928760 ATCCAGAAGGAGTCAACTCTGCACCTTGTCTTGCGCCTGCGGGGTGGTAA 928809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398862541774837