Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq1223 129 1e-24
>seq1223
Length=7284131
Score = 129 bits (142), Expect = 1e-24
Identities = 125/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438
|| ||||||||||||||| | |||||||| || ||||| || |||||||| || |||||
Sbjct 1989900 GCTTTATGGTGGTACTATGTCTCTAAAGGAATTGAATATTTGGATACAGTATTCTTCATC 1989959
Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498
|| || || || ||||| || |||| || || || || ||||| ||||| || |||||
Sbjct 1989960 CTGAGAAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 1990019
Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
|| || | ||| | |||||||| ||| ||||||| || ||
Sbjct 1990020 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 1990060
Score = 91.5 bits (100), Expect = 3e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 58669 GGTACAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTT 58728
||| || |||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 1992902 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 1992961
Query 58729 TCCAAAATGGACGCAATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGG 58788
|| ||||||| ||| ||| || || ||||| |||| || || || || |||||||
Sbjct 1992962 CCCTAAATGGATGCACTGGGGTGTCATTTTCTATGCTATCACCTTCATTTTCCTGTTTGG 1993021
Query 58789 TAACTTCTATTTTAGAACATACAAG 58813
||||||||| | | | ||||| |||
Sbjct 1993022 TAACTTCTACTATCGGACATATAAG 1993046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903378078686880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |