Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2502 165 8e-36 >seq2502 Length=4400873 Score = 165 bits (182), Expect = 8e-36 Identities = 157/198 (79%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| | || | | | ||||| ||||||||||| Sbjct 928180 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCA-TCCTCCAGCTGCTTGCC 928122 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||||| ||||||||| |||||||||||||||||||| |||||| ||| Sbjct 928121 AGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 928062 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||||| |||||| |||||||||| || | ||||| ||| ||||| ||||| || Sbjct 928061 GACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGT 928002 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 928001 CTTGACGAAGATCTGCAT 927984 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || || || | | | ||||| ||||| || || Sbjct 928776 GTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCA-TCCTCCAGCTGTTTCCC 928718 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| ||||||||||||||||| || |||||| || Sbjct 928717 AGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTTT 928658 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| ||||||| || || | |||| || ||||| ||||| || Sbjct 928657 GACATTTTCAATGGTGTCACTGGGCTCGACTTCCAGAGTGATTGTCTTGCCCGTCAGGGT 928598 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 928597 CTTGACAAAGATCTGCAT 928580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483403076584920