Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 165 8e-36
>seq2502
Length=4400873
Score = 165 bits (182), Expect = 8e-36
Identities = 157/198 (79%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| |||||||| || ||||| ||| | || | | | ||||| |||||||||||
Sbjct 928180 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCA-TCCTCCAGCTGCTTGCC 928122
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| ||||||||| ||||||||| |||||||||||||||||||| |||||| |||
Sbjct 928121 AGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 928062
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| |||||||||| || | ||||| ||| ||||| ||||| ||
Sbjct 928061 GACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGT 928002
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 928001 CTTGACGAAGATCTGCAT 927984
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| || || || | | | ||||| ||||| || ||
Sbjct 928776 GTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCA-TCCTCCAGCTGTTTCCC 928718
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || |||| ||||||||| ||||||||||||||||| || |||||| ||
Sbjct 928717 AGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTTT 928658
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| ||||| ||||||| || || | |||| || ||||| ||||| ||
Sbjct 928657 GACATTTTCAATGGTGTCACTGGGCTCGACTTCCAGAGTGATTGTCTTGCCCGTCAGGGT 928598
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 928597 CTTGACAAAGATCTGCAT 928580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483403076584920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |