Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq192 116 1e-22 seq2515 98.7 3e-17 seq2502 98.7 3e-17 seq880 98.7 3e-17 >seq192 Length=2822607 Score = 116 bits (128), Expect = 1e-22 Identities = 69/72 (96%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1985578 GCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1985637 Query 2829 CCGGGCTTCAGC 2840 |||||||||||| Sbjct 1985638 CCGGGCTTCAGC 1985649 Score = 114 bits (126), Expect = 4e-22 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct 1999452 GCTGAAGTAGCTCAGCTGGGAGAGYGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1999393 Query 2829 CCGGGCTTCAGC 2840 |||||||||||| Sbjct 1999392 CCGGGCTTCAGC 1999381 Score = 109 bits (120), Expect = 2e-20 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| Sbjct 1986743 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCTCTGGTTCAAT 1986802 Query 2828 CCCGGGCTTCAGC 2840 || |||||||||| Sbjct 1986803 CCTGGGCTTCAGC 1986815 >seq2515 Length=105315 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 81205 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 81264 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 81265 CCGGGTTTCGGC 81276 >seq2502 Length=4400873 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 924249 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 924308 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 924309 CCGGGTTTCGGC 924320 >seq880 Length=1738505 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 795173 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 795114 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 795113 CCGGGTTTCGGC 795102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849091549785