Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq192 116 1e-22
seq2515 98.7 3e-17
seq2502 98.7 3e-17
seq880 98.7 3e-17
>seq192
Length=2822607
Score = 116 bits (128), Expect = 1e-22
Identities = 69/72 (96%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1985578 GCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1985637
Query 2829 CCGGGCTTCAGC 2840
||||||||||||
Sbjct 1985638 CCGGGCTTCAGC 1985649
Score = 114 bits (126), Expect = 4e-22
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1999452 GCTGAAGTAGCTCAGCTGGGAGAGYGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1999393
Query 2829 CCGGGCTTCAGC 2840
||||||||||||
Sbjct 1999392 CCGGGCTTCAGC 1999381
Score = 109 bits (120), Expect = 2e-20
Identities = 68/73 (93%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1986743 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCTCTGGTTCAAT 1986802
Query 2828 CCCGGGCTTCAGC 2840
|| ||||||||||
Sbjct 1986803 CCTGGGCTTCAGC 1986815
>seq2515
Length=105315
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 81205 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 81264
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 81265 CCGGGTTTCGGC 81276
>seq2502
Length=4400873
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 924249 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 924308
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 924309 CCGGGTTTCGGC 924320
>seq880
Length=1738505
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 795173 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 795114
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 795113 CCGGGTTTCGGC 795102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15849091549785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |