Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1659 111 2e-19 >seq1659 Length=6985037 Score = 111 bits (122), Expect = 2e-19 Identities = 198/289 (69%), Gaps = 0/289 (0%) Strand=Plus/Plus Query 214605 AAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACTCTAC 214664 |||||||| || | |||||||||| | ||||| || ||||| ||| | || || ||| Sbjct 4733215 AAGGAGATGGCGGCGGAGCTGGAGGAGCTGTACGGGGACATCGACGCCATGGAGCTGTAC 4733274 Query 214665 GCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCTCGAG 214724 | | | || | || || || | || | |||||| | || || | | | ||| Sbjct 4733275 CCAGGGCTGCTGGTGGAGAAGCCCCGGCCTGGGGCCATCTTTGGCGAGACCATGGTGGAG 4733334 Query 214725 TCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGGCTAC 214784 |||||| || |||||||||| ||| || || |||| |||||||||||| | ||| Sbjct 4733335 ATGGGGGCGCCCTTCTCCCTGAAGGGGCTGATGGGCAACGCCATCTGCTCCCCCGAGTAC 4733394 Query 214785 TGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGACCCTT 214844 ||||| | || ||| |||| || | | | ||| ||||||| | | || |||| Sbjct 4733395 TGGAAGCCCAGCACCTTCGGGGGCAAGGTGGGCTTCGACATCGTCAACACAGCCTCCCTG 4733454 Query 214845 CAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCCGTTAGCCGCATTCC 214893 ||| ||| |||| | |||||||||||| ||||| || | || |||| Sbjct 4733455 CAGAAGCTCGTCTGCAACAACGTCAAGGGCTGTCCCTTCACTGCCTTCC 4733503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723314280517920