Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq2350 91.5 2e-13
>seq2350
Length=253660
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713
|||||||| |||| ||||||||||| | || |||| ||| || || ||||||||||||
Sbjct 174149 CCGATGCCGCCGGCAGACTTGGAGATGAGGGCACACTGCTTCAGGGTGTCGTAGATGCCC 174090
Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCT 79751
||||| |||||||||||| | ||||||||||||
Sbjct 174089 TCGATGCTGTCGTCCTTCATGCACAGCAGGAAGCAGCT 174052
Score = 91.5 bits (100), Expect = 2e-13
Identities = 109/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 79098 CTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCT 79157
||| | ||| || ||||||| || ||||||||||||| | ||||| |||||||||
Sbjct 176726 CTCCACGATCTCCGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCT 176667
Query 79158 CTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTT 79217
|||| ||| |||| |||||||||| |||||| || || || |||||| ||| ||
Sbjct 176666 CTTCCTGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCCAGTCTCAGTCTGGGACTC 176607
Query 79218 GAGAACGCCGTCCCAGATGTCCCGGGCC 79245
|| | | ||| ||||| | | |||||
Sbjct 176606 GATGATGGCGTACCAGAGCTGCTGGGCC 176579
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312
||||| ||||| || |||||||| |||||||| |||||||||||||| || || |||
Sbjct 174052 AGCTGCTTCCTGCTGTGCATGAAGGACGACAGCATCGAGGGCATCTACGACACCCTGAAG 174111
Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG 19350
|||| || | ||||||||||| |||| || |||||
Sbjct 174112 CAGTGTGCCCTCATCTCCAAGTCTGCCGGCGGCATCGG 174149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548504689709520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |