Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq1223 132 6e-26
>seq1223
Length=7284131
Score = 132 bits (146), Expect = 6e-26
Identities = 126/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729
|| || |||| || | | |||||||||| || |||||| | ||||| | ||||||||
Sbjct 1989900 GCTTTATGGTGGTACTATGTCTCTAAAGGAATTGAATATTTGGATACAGTATTCTTCATC 1989959
Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789
|||||||||||||||||||| |||| || | || || || |||||||| ||||||||
Sbjct 1989960 CTGAGAAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 1990019
Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830
|| || | ||||| || ||||| ||| ||||||| |||||
Sbjct 1990020 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 1990060
Score = 82.4 bits (90), Expect = 9e-11
Identities = 100/135 (74%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 32826 GGACAGGCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTAT 32885
|||||| | ||||| ||||| || || ||| | ||||| ||||| || ||||| | |||
Sbjct 1992272 GGACAG-CTTTTTTCGGAGCTCAAATGAATGCATTTATTCATGTCATTATGTACATGTAT 1992330
Query 32886 TACGGATTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTA 32945
||||||||| |||| || ||| || | ||||| || ||||||||| ||||||
Sbjct 1992331 TACGGATTAGCAGCTTGCGGCCCTAAATTTCAGAAATACCTGTGGTGGAAACGATATTTG 1992390
Query 32946 ACTATCATACAATTG 32960
|| || | ||||||
Sbjct 1992391 ACCATATTGCAATTG 1992405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603158685883920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |