Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq2535 98.7 8e-16 seq2346 96.9 3e-15 >seq2535 Length=4254303 Score = 98.7 bits (108), Expect = 8e-16 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 |||||||| | || |||||||||||||| | || |||||||| | ||| ||||| Sbjct 4141010 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 4140951 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || || || ||||||||| | || ||||| || | ||||||||| | || || ||| | Sbjct 4140950 ACTCCTAGTCCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGA 4140891 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 ||||| ||||| | | | || || ||||||| | |||| Sbjct 4140890 ACATAGAACTGGCAAAGGGCATGGCAYGGAGGCAAAGCCAT 4140850 >seq2346 Length=5167554 Score = 96.9 bits (106), Expect = 3e-15 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 3270 GGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGGTGGTGTTATGTGTGTGGAAA 3329 |||| |||||||| | ||||| || ||||| |||||||| ||||| ||||||||||| | Sbjct 4941495 GGGTTAACTGGGGCAGAATTGTGGCCTTCTTCGAGTTTGGCGGTGTCATGTGTGTGGAGA 4941436 Query 3330 GCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGCCGCGTGGATGACAGA 3384 ||||||| | | || | ||||||| |||| ||| || || |||||||| || Sbjct 4941435 GCGTCAACCGGGAGATGTCYCCCCTCGTGGACAGCATCGCTGCCTGGATGACTGA 4941381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414461984138212