Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq2535 98.7 8e-16
seq2346 96.9 3e-15
>seq2535
Length=4254303
Score = 98.7 bits (108), Expect = 8e-16
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|||||||| | || |||||||||||||| | || |||||||| | ||| |||||
Sbjct 4141010 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 4140951
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| || || ||||||||| | || ||||| || | ||||||||| | || || ||| |
Sbjct 4140950 ACTCCTAGTCCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGA 4140891
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694
||||| ||||| | | | || || ||||||| | ||||
Sbjct 4140890 ACATAGAACTGGCAAAGGGCATGGCAYGGAGGCAAAGCCAT 4140850
>seq2346
Length=5167554
Score = 96.9 bits (106), Expect = 3e-15
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 3270 GGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGGTGGTGTTATGTGTGTGGAAA 3329
|||| |||||||| | ||||| || ||||| |||||||| ||||| ||||||||||| |
Sbjct 4941495 GGGTTAACTGGGGCAGAATTGTGGCCTTCTTCGAGTTTGGCGGTGTCATGTGTGTGGAGA 4941436
Query 3330 GCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGCCGCGTGGATGACAGA 3384
||||||| | | || | ||||||| |||| ||| || || |||||||| ||
Sbjct 4941435 GCGTCAACCGGGAGATGTCYCCCCTCGTGGACAGCATCGCTGCCTGGATGACTGA 4941381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414461984138212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |