Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2535 102 7e-17 seq2045 91.5 1e-13 >seq2535 Length=4254303 Score = 102 bits (112), Expect = 7e-17 Identities = 123/162 (76%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG-TGCTCGAA 30075 ||||||||||||||||| || ||||| ||||| | || ||||| || ||| |||| ||| Sbjct 4137301 AAATGCCTCCACTGGAAACCATACACTGGTCCTAAATCACCCTCCTCTCTGGTGCT-GAA 4137243 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| ||| |||| || || | ||| || || || ||||| ||||| || || || | Sbjct 4137242 ACCCTGCTTATCCAGGAACTCACGGGACCCATTAGCATCCCAAATCTTCACACCTTTTGC 4137183 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAG 30177 ||||||||||||| ||||| || || || || || ||||| Sbjct 4137182 AGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAACACAG 4137143 >seq2045 Length=838734 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || |||||||||||||| || | || | |||||| | | ||| | ||||| || || Sbjct 513547 TTGAGCTCCCTGCTGAGCACAATATTAATTCTGTCTTTTAAAGGACGGTTCTTCTCAGGA 513488 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||| || |||||||||||||||| ||||||| |||||| Sbjct 513487 ATGGAGAACCACGTTTTTCTACCCATTATCAGTGCGTTCTGTTTACCT 513440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406148681315638