Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 134 3e-26
>seq2502
Length=4400873
Score = 134 bits (148), Expect = 3e-26
Identities = 160/216 (74%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| || ||||| ||||||||||| |||| | || | ||||| || |
Sbjct 928190 CAAG-TGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCA 928132
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || ||||| || |||||||||||||| | | ||| |||||||| ||||| |
Sbjct 928131 GCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGA 928072
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| |||| | | |||| ||| || ||||| || || || ||||
Sbjct 928071 TCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTCTTGC 928012
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACCCT 152112
|||| || ||||| ||||||| ||||||||| ||||
Sbjct 928011 CCGTCAGGGTCTTGACGAAGATCTGCATTTTTCCCT 927976
Score = 132 bits (146), Expect = 1e-25
Identities = 158/213 (74%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
|||||| || ||||| ||||| || ||||||||||| || | | || | ||||| ||
Sbjct 928789 GACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTC 928730
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
|| |||||| || ||||| |||||||||||||| | | ||| |||||||| || ||
Sbjct 928729 CAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTG 928670
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGT 152071
|| || ||||||| | || | | |||| ||| ||| ||||| ||||| || ||
Sbjct 928669 GATCTTGGCTTTGACATTTTCAATGGTGTC---ACTGGGCTCGACTTCCAGAGTGATTGT 928613
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||||| || ||||| || |||| ||||||
Sbjct 928612 CTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 928580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153777440496043
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |