Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2502 134 3e-26 >seq2502 Length=4400873 Score = 134 bits (148), Expect = 3e-26 Identities = 160/216 (74%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || ||||| ||||||||||| |||| | || | ||||| || | Sbjct 928190 CAAG-TGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCA 928132 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||| || |||||||||||||| | | ||| |||||||| ||||| | Sbjct 928131 GCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGA 928072 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| |||| | | |||| ||| || ||||| || || || |||| Sbjct 928071 TCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTCTTGC 928012 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACCCT 152112 |||| || ||||| ||||||| ||||||||| |||| Sbjct 928011 CCGTCAGGGTCTTGACGAAGATCTGCATTTTTCCCT 927976 Score = 132 bits (146), Expect = 1e-25 Identities = 158/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| || ||||| ||||| || ||||||||||| || | | || | ||||| || Sbjct 928789 GACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTC 928730 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || |||||| || ||||| |||||||||||||| | | ||| |||||||| || || Sbjct 928729 CAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTG 928670 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGT 152071 || || ||||||| | || | | |||| ||| ||| ||||| ||||| || || Sbjct 928669 GATCTTGGCTTTGACATTTTCAATGGTGTC---ACTGGGCTCGACTTCCAGAGTGATTGT 928613 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || ||||| || |||| |||||| Sbjct 928612 CTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 928580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153777440496043