Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2502 113 3e-20 >seq2502 Length=4400873 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | ||| || ||||| || || |||||| ||||||||||| || | Sbjct 928806 CCACCCCGCAGGCGCAAGACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAC 928747 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || |||||||| ||||| |||||||||| | |||||| || | ||| Sbjct 928746 AGGGTACGGCCATCCTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 928687 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||||| ||| ||||| || | || | |||||||| || || || Sbjct 928686 ATGCCTTCCTTATCCTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCGACT 928627 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || ||||| ||||| |||||||| || ||||| ||||| Sbjct 928626 TCCAGAGTGATTGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 928580 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 44117 CTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGG 44176 || || | || ||||| ||| || ||| || || ||||||||||| |||| ||| Sbjct 928204 CTGAGGCGCAGCACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTA 928145 Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236 || | || ||||||||||| || || || || | | |||||| || | ||| | ||| Sbjct 928144 CGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCT 928085 Query 44237 TCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296 ||||| || ||||| ||| | | | ||||||||| || |||||||| | Sbjct 928084 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGG 928025 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| ||||| |||||||| |||||||| ||||| Sbjct 928024 GTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 927984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359977531805661