Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 113 3e-20
>seq2502
Length=4400873
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | ||| || ||||| || || |||||| ||||||||||| || |
Sbjct 928806 CCACCCCGCAGGCGCAAGACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAC 928747
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || | || |||||||| ||||| |||||||||| | |||||| || | |||
Sbjct 928746 AGGGTACGGCCATCCTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 928687
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| ||| ||||| || | || | |||||||| || || ||
Sbjct 928686 ATGCCTTCCTTATCCTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCGACT 928627
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || || ||||| ||||| |||||||| || ||||| |||||
Sbjct 928626 TCCAGAGTGATTGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 928580
Score = 111 bits (122), Expect = 1e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 44117 CTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGG 44176
|| || | || ||||| ||| || ||| || || ||||||||||| |||| |||
Sbjct 928204 CTGAGGCGCAGCACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTA 928145
Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236
|| | || ||||||||||| || || || || | | |||||| || | ||| | |||
Sbjct 928144 CGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCT 928085
Query 44237 TCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296
||||| || ||||| ||| | | | ||||||||| || |||||||| |
Sbjct 928084 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGG 928025
Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| ||||| |||||||| |||||||| |||||
Sbjct 928024 GTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 927984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359977531805661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |