Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alligator_20mississippiensis_20[refseq_20GCF_5F000281125.3_202016- 03-28] 7,094 sequences; 2,161,730,208 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq6807 244 1e-59 seq2395 226 4e-54 seq2185 179 5e-40 seq4379 100 4e-16 >seq6807 Length=9299346 Score = 244 bits (270), Expect = 1e-59 Identities = 1017/1592 (64%), Gaps = 27/1592 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| || || || || ||||| || || || || | || ||| Sbjct 5385135 GCGATCGGCATCGACTTGGGCACCACGTACTCCTGCGTGGGCGTCTTCCAGCATGGCAAG 5385194 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || | || ||||| || ||||| || || || ||||| ||||| || Sbjct 5385195 GTGGAGATCATTGCCAACGACCAGGGCAACCGCACCACGCCCAGCTACGTGGCCTTCACG 5385254 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || ||| | || || || || || || ||| || |||||||| | ||| Sbjct 5385255 GACACGGAGCGCCTCATCGGCGACGCGGCCAAGAACCAGGTGGCCATGAACCCCACCAAC 5385314 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||| ||||| ||||| || || || ||||||| || | || || | Sbjct 5385315 ACCATCTTCGACGCCAAGCGCCTCATCGGCCGCAAGTACGACGACCCCACGGTGCAGGCG 5385374 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTATGATTAA 195597 || || ||| ||||| | | | || || ||| | | ||| ||||| | | | | Sbjct 5385375 GACATGAAGCACTGGCCCTTCCACGTAGTGTCCGAGGGCGGC----AAGCCCAAGGTGCA 5385430 Query 195598 TGTTGAATTTCACGGTGAGAAGAA-ACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656 || || | | | || ||| || || | | | |||||||| || || |||||| Sbjct 5385431 GGTGGAGTATAAGGGCGAGGCCAAGACCTTCTTC-CCCGAAGAGATCAGCTCCATGGTGC 5385489 Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 ||| |||||||||||||| || ||| | | | |||| | ||| | | || || Sbjct 5385490 TGACTAAGATGAAGGAGATCGCCGAAGCCTACCTGGGCCGCAAGGTGCAGAACGCCGTCA 5385549 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 | || || || || ||||||| || || || || ||||| || |||||||| | | | Sbjct 5385550 TCACGGTGCCCGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGACGCGGGCACCA 5385609 Query 195777 TTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | |||| || ||| | | || ||||| || || || ||||| || || || || | Sbjct 5385610 TCACGGGCCTCAACGTGATGCGCATCATCAACGAGCCCACGGCGGCCGCCATCGCCTACG 5385669 Query 195837 GTCTGGACAAGAA---CAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | ||||||||||| | | | || || || || || ||||||| || || || | Sbjct 5385670 GGCTGGACAAGAAGGGCGCGCGCGCCGGCGAGAAGAACGTGCTGATCTTCGACCTGGGCG 5385729 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 | || || || || || || | |||| || || | || || ||||| || ||| | | Sbjct 5385730 GCGGCACCTTCGACGTGTCCATCCTCACCATCGAGGACGGCATCTTCGAGGTGAAGTCGA 5385789 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || || || || || || || || || || ||||| || | | || || Sbjct 5385790 CGGCGGGCGACACGCACCTGGGCGGCGAGGACTTCGACAACCGCATGGTGACGCACTTCG 5385849 Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 || |||||| || ||| | ||| || || || || |||| | || | Sbjct 5385850 TGGAGGAGTTCAAGCGCAAGCACAAGCGCGACATCGGCGGCAACAAGCGGGCGGTGCGGC 5385909 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCT---CTCTTCTACGGCTCAAACAA 196127 |||| | || || || || || ||||| || || || ||| || ||| || | | Sbjct 5385910 GGCTGCGCACGGCGTGCGAGCGGGCCAAGCGCACGCTGAGCTCCTCCACG---CAGGCCA 5385966 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 | ||||| || ||| |||| || || || |||||||| || | || || || || | Sbjct 5385967 GCATCGAGATCGACTCGCTGTTCGAGGGCATCGACTTCTACACGTCCATCACGCGGGCGC 5386026 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 | || || ||| | ||| | || |||| | |||| || || || | | | Sbjct 5386027 GCTTCGAGGAGCTGAACGCCGACCTGTTCCGCGGCACGCTGGAGCCCGTGGAGAAGGCGC 5386086 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | || ||||| ||| |||| ||| |||| | || || || || ||||| || || | Sbjct 5386087 TGCGCGACGCCAAGCTGGACAAGGGGCAGGTGCAGGAGATCGTGCTGGTGGGCGGCTCGA 5386146 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367 | || || || ||||| || || |||| |||||||||| || || | |||| Sbjct 5386147 CGCGCATCCCCAAGATCCAGAAGCTGCTGCAGGACTTCTTCAATGGCAAGGAGCTGAACA 5386206 Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427 | | |||||||| || || || || || || || ||||| || ||||| || || || Sbjct 5386207 AGAGCATCAACCCCGACGAGGCGGTGGCGTACGGCGCGGCGGTGCAGGCCGCCAT--CCT 5386264 Query 196428 CAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 || | | ||||| | ||||| || || || ||||| || || || | || | | Sbjct 5386265 CATG-GGCGACAAGTCGGAGAACGTGCAGGACCTGCTGCTGCTGGACGTGACGCCGCTGT 5386323 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 | || || | || || ||||| || || ||||| | || | | ||||| || | Sbjct 5386324 CGCTCGGCATCGAGACGGCGGGCGGCGTCATGACGGCGCTCATCAAGCGCAACACCACCA 5386383 Query 196545 TTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCAT 196603 | || || ||| || || ||| | || || || || || || | || | || | Sbjct 5386384 TCCCCACCAAGCAGACGCAGACCTTCACCACCTACTCGGACAACCAGAGCA-GCGTGCTG 5386442 Query 196604 ATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTC 196663 | || || || || || || ||| || | ||||| ||| | || || || | ||| Sbjct 5386443 GTGCAGGTGTACGAGGGCGAGCGCGCCATGACCAAGGACAACAACCTGCTGGGCAAGTTC 5386502 Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723 || |||| || || || | || || | || || || ||||| | || ||||| Sbjct 5386503 GACCTGACCGGCATCCCGCCCGCGCCGCGCGGCGTGCCGCAGATCGAGGTCACTTTCGAC 5386562 Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783 || ||||| || || || || ||||| | || | |||||| | ||||| | Sbjct 5386563 ATCGACGCCAACGGCATCCTCAACGTGAGCGCGGTCGACAAGAGCACGGGCAAGGAGAAC 5386622 Query 196784 AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTT 196843 ||||| || ||||| |||||||| ||||| ||||| || || || || ||||| Sbjct 5386623 AAGATCACCATCACCAACGACAAGGGCCGGCTCAGCAAGGACGACATCGACCGCATGGTG 5386682 Query 196844 CAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 || || || || ||||||| || || ||||| Sbjct 5386683 CAGGAGGCCGAGAAGTACAAGGCGGAGGACGA 5386714 >seq2395 Length=5449122 Score = 226 bits (250), Expect = 4e-54 Identities = 381/545 (70%), Gaps = 10/545 (2%) Strand=Plus/Plus Query 195865 AAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGA 195924 |||||| ||||||||||| || |||||||| || || ||||| || |||||| ||||| Sbjct 3519415 AAATGTTTTGATCTTTGACCTGGGTGGTGGCACTTTCGATGTGTCTATTCTCACAATTGA 3519474 Query 195925 AGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTT 195984 || ||||| || ||||| ||| ||||||| |||||||| || || ||||| ||||| || Sbjct 3519475 AGACGGTATCTTTGAAGTGAAGTCTACTGCAGGTGATACCCACCTGGGTGGAGAAGACTT 3519534 Query 195985 CGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATAT 196044 ||| | | || || || || ||| ||| || ||| | |||||||| || Sbjct 3519535 TGATAACAGAATGGTCAACCACTTCATTGCTGAATTCAAACGCAAGCACAAGAAAGACAT 3519594 Query 196045 TTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAAC 196104 || ||| || || |||| || || | || |||||||||||||| || || || Sbjct 3519595 CAGTGAAAACAAGAGAGCAGTTCGCCGTCTCCGCACAGCATGTGAACGTGCAAAGCGTAC 3519654 Query 196105 TCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTT 196164 ||||| || | | || | | ||||||||||||| | | ||| || |||||||| Sbjct 3519655 CCTCTCCTCCAGCACGCAGGCCAGTATTGAGATTGATTCTCTCTATGAGGGCATTGACTT 3519714 Query 196165 CTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT---TAGGAA 196221 ||| || | || || || || || ||||||||||| ||| ||||| |||| | | | Sbjct 3519715 CTACACCTCAATCACACGAGCTCGCTTTGAAGAGTTGAACGCTGATCTGTTCCGTGGTAC 3519774 Query 196222 GTGTATGGAACCTGTTGAACAAGTACTT-CGTGACGCAAAGATGGATAAGTCTAAGGTTG 196280 | |||| |||| || | ||| ||| || || || ||| | || || || || | Sbjct 3519775 G---CTGGACCCTG-TGGAGAAGGCCTTGCGGGATGCCAAGCTCGACAAATCCCAGATCC 3519830 Query 196281 ATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTA 196340 | || || || | || || ||||| || || || || ||||||| | | | | | | | Sbjct 3519831 ACGACATAGTATTGGTTGGTGGATCCACTCGCATCCCAAAGATTC-AGAAACTCCTACAA 3519889 Query 196341 G-CTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTAT 196399 | |||||||||| ||||| | ||||| | ||||| || |||||||| || ||||| Sbjct 3519890 GACTTCTTCAATGGCAAAGAACTGAACAAGAGCATCAATCCTGATGAAGCTGTAGCTTAC 3519949 Query 196400 GGTGC 196404 ||||| Sbjct 3519950 GGTGC 3519954 Score = 134 bits (148), Expect = 2e-26 Identities = 121/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 195698 ACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCG 195757 ||||| | | |||| || || |||||||| || ||||||| ||| || || || ||||| Sbjct 3519125 ACTGTTACAAATGCTGTGGTCACTGTACCAGCCTACTTCAATGACTCCCAGCGCCAGGCC 3519184 Query 195758 ACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACA 195817 ||||| || |||| | ||||||| ||||| ||| || |||| ||||||||||||||| Sbjct 3519185 ACAAAAGATGCTGGTACTATTGCAGGTCTCAACGTACTCCGAATCATCAATGAACCAACA 3519244 Query 195818 GCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 || ||||| |||||||||||| | ||||| || Sbjct 3519245 GCTGCTGCTATTGCTTATGGTTTAGACAAAAA 3519276 Score = 86.0 bits (94), Expect = 8e-12 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 196445 AACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCG 196504 || || || ||||| ||||| | ||||| | || ||||||||||| |||||||||| Sbjct 3520445 AATGTACAGGATCTGCTGCTGTTGGATGTGACTCCTCTATCCCTGGGTATTGAAACAGCT 3520504 Query 196505 GGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAA 196564 || ||||||||||| | | ||| | | || || || || || |||||| || || Sbjct 3520505 GGAGGTGTTATGACAGTATTGATTAAGCGCAATACCACAATCCCCACTAAGCAGACTCAG 3520564 Query 196565 GTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATG 196616 ||| | || || || ||||| || || ||||| | ||| || |||| || Sbjct 3520565 ACATTTACCACTTACTCTGATAACCAGCCTGGTGTCCTTATCCAGGTATGTG 3520616 >seq2185 Length=13751209 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || ||||| |||||||||||| | Sbjct 8329206 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTCGAGGTTGAGCCCAGT 8329265 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || |||||||| || || ||||| |||||||| || || ||| Sbjct 8329266 GACACTATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 8329325 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| |||||||| || ||||| |||||||||| Sbjct 8329326 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGATTACAAT 8329385 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||||| || || ||||| || || | || ||||||| Sbjct 8329386 ATTCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGG 8329432 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || ||||| |||||||| ||| | Sbjct 8329890 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACTCTCGAGGTGGAGCCCAGT 8329949 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || |||||||| || || || ||||||||||| ||||| ||| Sbjct 8329950 GACACTATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCCGACCAG 8330009 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| |||||||| |||||||| || || || | || |||||| Sbjct 8330010 CAGAGGCTCATCTTTGCTGGGAAACAGCTAGAAGATGGCCGCACTCTGTCCGACTACAAC 8330069 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || ||||||| Sbjct 8330070 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGG 8330116 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || ||||| |||||||| ||| | Sbjct 8328978 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTCGAGGTGGAGCCCAGT 8329037 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || || || ||||||||||| ||||| ||| Sbjct 8329038 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCCGACCAG 8329097 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||||||||| ||||| ||||||||||| ||||| |||| |||||| Sbjct 8329098 CAGAGGCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 8329157 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || ||||||| Sbjct 8329158 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGG 8329204 Score = 170 bits (188), Expect = 3e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || ||||| |||||||| ||| | Sbjct 8329662 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTCGAGGTGGAGCCCAGT 8329721 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| || || || ||||||||||| ||||| ||| Sbjct 8329722 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCCGACCAG 8329781 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||||||||| ||||| | || |||||| Sbjct 8329782 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 8329841 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || ||||||| Sbjct 8329842 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGG 8329888 Score = 168 bits (186), Expect = 9e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || || ||||| ||||| ||| | Sbjct 8330118 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATTACCCTGGAGGTGGAGCCCAGT 8330177 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| || || || ||||||||||| ||||| ||| Sbjct 8330178 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCCGACCAG 8330237 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| |||||||| || ||||| | || |||||| Sbjct 8330238 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 8330297 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||||||||| || ||||| || || | || |||||||| Sbjct 8330298 ATCCAGAAGGAGTCTACCCTGCACCTGGTGCTGCGCCTGAGGGGTGGT 8330345 >seq4379 Length=1760551 Score = 100 bits (110), Expect = 4e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 |||||||||||||| || || ||||| || ||||| || ||||| |||| || | ||| Sbjct 336083 AAGGATAACCATCTCCTGGGCACTTTTGACTTGACTGGAATTCCTCCTGCCCCTCGTGGT 336024 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 || || |||||| | ||| ||| || ||||| | |||||||| || || || ||| Sbjct 336023 GTCCCGCAGATTGAAGTTACCTTTGAGATAGATGTGAATGGAATCCTCCGTGTTACGGCT 335964 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816 || ||||||| | |||| || | ||||| ||||||||||| || || || Sbjct 335963 GAAGACAAGGGTACTGGGAACAAAAACAAGATCACAATTACCAATGATCAGAACCGTCTG 335904 Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGT 196859 | || || ||||| | |||||| ||||| || |||| Sbjct 335903 ACCCCAGAAGAGATTGAGAGAATGGTTACTGATGCTGAGAAGT 335861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657804064051680