Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alligator_20sinensis_20[refseq_20GCF_5F000455745.1_202013-08-29] 9,317 sequences; 2,270,567,745 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq258 118 7e-22 seq685 113 3e-20 seq405 113 3e-20 seq6 113 3e-20 seq339 105 4e-18 seq63 104 2e-17 seq29 104 2e-17 seq780 100 2e-16 seq5 100 2e-16 seq61 98.7 7e-16 seq743 95.1 8e-15 seq587 95.1 8e-15 seq1949 91.5 1e-13 seq1755 91.5 1e-13 seq917 91.5 1e-13 seq531 89.7 3e-13 seq165 87.8 1e-12 seq42 86.0 4e-12 >seq258 Length=2522561 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 ||||||||||||||||||||||||| |||| ||||||| ||||| | |||||||| Sbjct 838499 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTAAATAGTAGGTAGGGACAGTAGGAATCTCGT 838558 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 838559 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 838593 >seq685 Length=1154951 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||| ||||| ||||| || |||||| | Sbjct 555115 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGACAGTAGGTAGGGACAGTGGGAATCTCAT 555056 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||| |||||||||||||||||| Sbjct 555055 TCATCCATTCATGCGTATCACTAATTAGATGACGA 555021 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||| ||||||||||||||||||||||||||| | |||| ||||| |||||||||||| Sbjct 553613 CTCTATCTTCAAAGTTCTTTTCAACTTTCCCTTATGGTATTTGTTGACTATCGGTCTCGT 553554 Query 20007 GGTAATATTTAGCCTTA 20023 | | | |||||||||| Sbjct 553553 GCCAGTTTTTAGCCTTA 553537 >seq405 Length=1880284 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| |||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 605467 AAGCCAGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGT 605526 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| | ||||||||||||||| || Sbjct 605527 TCATCCATTCATGCCCATCACTAATTAGATGATGA 605561 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 608902 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGT 608961 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 608962 GCCGGTATTTAGCCTTA 608978 >seq6 Length=7146147 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| ||||||||||||||||| ||||| || |||||||| Sbjct 5901396 AAGCCCGTTCCCTTGGCTGTAGTTTCGCTAGATAGTAGGTAGGGACAGCGGGAATCTCGT 5901455 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||| | || |||||||||||||||||| Sbjct 5901456 TCATCCATTCACGTGCATCACTAATTAGATGACGA 5901490 >seq339 Length=2145283 Score = 105 bits (116), Expect = 4e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 710416 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTAACTATCGGTCTCGT 710475 Query 20007 GGTAATATTTAGCCTT 20022 | | ||||||||||| Sbjct 710476 GCTGGTATTTAGCCTT 710491 >seq63 Length=4393237 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 2558202 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGT 2558261 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 2558262 GCCGGTATTTAGCCTTA 2558278 >seq29 Length=5344911 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 4439342 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGT 4439283 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 4439282 GCCGGTATTTAGCCTTA 4439266 >seq780 Length=1004500 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || || | ||||| ||||| || || ||| ||||| || || ||||| |||||| Sbjct 815608 CCGCCCCTGAGACGCAGCACCAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 815667 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || |||| || || |||||||| || || | || || || | ||| Sbjct 815668 AGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 815727 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||||||| || || ||||||||||| | || || | ||||| Sbjct 815728 ATGCCTTCTTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACC 815787 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || | || || || || || |||| ||| |||||||| ||||||||||| Sbjct 815788 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATGTT 815837 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| || | ||||| ||||| ||| || ||| ||||| || || ||||| || || Sbjct 815151 ACCACCCCTGAGACGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 815210 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || || | || |||| || || |||||||| || || | || || || | ||| Sbjct 815211 CAGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 815270 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||||||||||| || || ||||||||||| | || || | ||||| Sbjct 815271 AATGCCTTCTTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGGGCTCAAC 815330 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | || || || || || |||| ||| ||||| || ||||||||| Sbjct 815331 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 815379 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || || | ||||| ||||| ||| || ||| ||||| || || ||||| || ||| Sbjct 815380 CCGCCCCTGAGACGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 815439 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || |||| || || || ||||| || || | || || || | ||| Sbjct 815440 AGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 815499 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||||||| || || |||||| |||| | || || | ||||| Sbjct 815500 ATGCCTTCTTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACC 815559 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | || || || || || |||| || |||||||| ||||||||| Sbjct 815560 TCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCATG 815607 >seq5 Length=7401140 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||||||| |||| ||||| || || || |||||| ||||||||||| || ||| Sbjct 630716 CCACCTCTCAAGCGCAGCACCAGGTGCAGGGTAGACTCCTTCTGAATATTGTAGTCGGAC 630657 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || |||| ||||| || ||||| || || | || || |||| ||| Sbjct 630656 AGGGTGCGGCCATCTTCTAGCTGTTTCCCAGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 630597 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||| ||||| || || |||||| |||| || || || | || || Sbjct 630596 ATGCCTTCTGTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACGGGGCTCCACC 630537 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||| | || || || || | || |||||||| ||||||||| Sbjct 630536 TCGAGTGTGACGGTCTTGCCGGTTAGGGGCTTCACGAAGATCTGCATG 630489 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||||||| |||| ||||| || || || |||||| ||||||||||| || ||| Sbjct 630944 CCACCTCTCAAGCGCAGCACCAGGTGCAGGGTAGACTCCTTCTGAATATTGTAGTCGGAC 630885 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || |||| ||||| || ||||| || || | || || |||| ||| Sbjct 630884 AGGGTGCGGCCATCTTCTAGCTGTTTCCCAGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 630825 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||| ||||| || || |||||| |||| || || || | || || Sbjct 630824 ATGCCTTCTGTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACGGGGCTCCACC 630765 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||| | || || || || | || |||||||| ||||||||| Sbjct 630764 TCGAGTGTGACGGTCTTGCCGGTTAGGGGCTTCACGAAGATCTGCATG 630717 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||||||| |||| ||||| || || || |||||| ||||||||||| || ||| Sbjct 631172 CCACCTCTCAAGCGCAGCACCAGGTGCAGGGTAGACTCCTTCTGAATATTGTAGTCGGAC 631113 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || |||| ||||| || ||||| || || | || || |||| ||| Sbjct 631112 AGGGTGCGGCCATCTTCTAGCTGTTTCCCAGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 631053 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||| ||||| || || |||||| |||| || || || | || || Sbjct 631052 ATGCCTTCTGTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACGGGGCTCCACC 630993 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||| | || || || || | || |||||||| ||||||||| Sbjct 630992 TCGAGTGTGACGGTCTTGCCGGTTAGGGGCTTCACGAAGATCTGCATG 630945 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||||||| |||| ||||| || || ||| || || || || ||||| |||||| Sbjct 630488 CCACCTCTCAAGCGCAGCACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 630429 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | || ||||| ||||| || || | || || |||| ||| Sbjct 630428 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 630369 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| || || ||||||||||| | || || | || || Sbjct 630368 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 630309 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 || | || || || || || |||| ||| |||||||| |||||||||||| Sbjct 630308 TCAAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATGTTT 630258 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 |||||||| |||| |||| ||||| || || || |||||| ||||||||||| || Sbjct 631403 TTACCACCCCTCAGGCGCAGCACCAGGTGCAGGGTAGACTCCTTCTGAATATTGTAGTCG 631344 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 |||| || | || |||| ||||| || ||||| || || | || || |||| | Sbjct 631343 GACAGGGTGCGGCCATCTTCTAGCTGTTTCCCAGCAAAGATGAGCCTCTGCTGGTCGGGG 631284 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | ||||||| ||||| || || |||||| |||| || || || | || Sbjct 631283 GGAATGCCTTCTGTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACGGGGCTCC 631224 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || | ||| | || || || || | || |||||||| ||||||||| Sbjct 631223 ACCTCGAGTGTGACGGTCTTGCCGGTTAGGGGCTTCACGAAGATCTGCATG 631173 >seq61 Length=4422038 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 2481644 CTCTCTCGTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGT 2481585 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 2481584 GCCGGTATTTAGCCTTA 2481568 >seq743 Length=1054728 Score = 95.1 bits (104), Expect = 8e-15 Identities = 78/95 (82%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| ||||||||||||| |||| ||||||||||| ||||| || |||||| | Sbjct 4163 AAGCCCATTCCCTTGGCTGTCCTTTCACTAGATAGTAGGTAGGGACAATGGGAATCTCAT 4222 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| | ||||||||||||||| || Sbjct 4223 TCATCCATTCATGCACATCACTAATTAGATGATGA 4257 Score = 82.4 bits (90), Expect = 5e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||||||||||||||||||||||||||||| | ||| ||||| |||||||||| | | Sbjct 9577 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTATGGTTGTTGTTGACTATCGGTCTTGTGC 9636 Query 20009 TAATATTTAGCCTTA 20023 | | |||||||||| Sbjct 9637 CAGTTTTTAGCCTTA 9651 >seq587 Length=1367565 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||| | | |||||||||| |||||||||||| Sbjct 439427 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCTTTATGGTACTTGTTGACTATCGGTCTCGT 439368 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 439367 GCCGGTATTTAGCCTTA 439351 >seq1949 Length=48478 Score = 91.5 bits (100), Expect = 1e-13 Identities = 64/73 (88%), Gaps = 5/73 (7%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 38394 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGT 38335 Query 25957 TAATCCTTTCATG 25969 | |||| |||||| Sbjct 38334 TCATCCATTCATG 38322 >seq1755 Length=87189 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| || ||| |||||||||||| |||||||||||| ||||| || ||||| || Sbjct 60719 AAGTCCAATCCGTTGGCTGTGGTTATGCTAGATAGTAGGTAGGGACAGTGGGAATCTTGT 60660 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| ||||||||||||||||||| Sbjct 60659 TCATCCATTCATGCATGTCACTAATTAGATGACGA 60625 >seq917 Length=777872 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/77 (87%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||| |||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 690852 CTCTCTCT--AAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGT 690909 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 690910 GCCGGTATTTAGCCTTA 690926 >seq531 Length=1503200 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||| | | |||||||||| |||| ||||||| Sbjct 890496 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCGTTATGGTACTTGTTGACTATTGGTCTCGT 890555 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 890556 GCCGGTATTTAGCCTTA 890572 >seq165 Length=3102812 Score = 87.8 bits (96), Expect = 1e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || |||||||||||||||||||||||||||| ||| | |||||||||| ||||| |||| Sbjct 1781801 TTACTCTCTCTTCAAAGTTCTTTTCAACTTTTCCTTATGGTACTTGTTGACTATCAGTCT 1781860 Query 20004 CGCGGTAATATTTAGCCT 20021 | | | |||||||||| Sbjct 1781861 CATGCCAGTATTTAGCCT 1781878 >seq42 Length=4865435 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||| |||||||||| |||| |||||||||||| |||| ||||||| Sbjct 2430303 CTCTCTCTTCAAAGTAATTTTCAACTTGCCCTTACGGTACTTGTTTACTATTGGTCTCGT 2430244 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 2430243 GCCGGTATTTAGCCTTA 2430227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334909166431427