Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alligator_20sinensis_20[refseq_20GCF_5F000455745.1_202013-08-29] 9,317 sequences; 2,270,567,745 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq718 86.0 8e-12 >seq718 Length=1082811 Score = 86.0 bits (94), Expect = 8e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798 |||||| || |||||||| | ||||||||||||| ||| | ||| |||||||| Sbjct 692966 CTCATCTTTGCTGGTGTACTCCACTATTTCCGTGCACAGGTTGCTGCACTTGATGGTGCC 693025 Query 118799 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 118858 || ||||| || || ||| |||||| | ||||| || |||||||| || || || Sbjct 693026 CAGGTTCTGCTGGTTGCTCTTCCGGTTACAAGAGTCCTTATACAGCATGTAAGGGGTACC 693085 Query 118859 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 118893 ||||| || ||||||| | || || | ||||| Sbjct 693086 GGTCTCAGTCTGGGACTCAATGATGGCATACCAGA 693120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618363175490520