Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 6e-13 >seq4 Length=156502444 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 145777 GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGC 145836 || ||||| ||||||||||| ||||||||||| || || | ||||| || || || ||| Sbjct 39524744 GTTAGCAGTGAGTAGCTGGCAATGTTGAAGGGTACTCCTAATCCCATATCTCCAGAACGC 39524685 Query 145837 TGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAG 145896 || |||| |||||| ||||| || || | || ||||||||||| || ||||| Sbjct 39524684 TGATACAACTGGCAAGAGAGTTCACCATTTACAACATAGAACTGGCAGAGAGCATGGCAA 39524625 Query 145897 GGCGGCAGGGCCATGGC 145913 || || | ||||| || Sbjct 39524624 GGGGGTAATGCCATTGC 39524608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590029173426280