Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 1e-15 seq1 87.8 2e-12 >seq2 Length=199619895 Score = 98.7 bits (108), Expect = 1e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 ||||||| ||||||||||| || ||||| | ||||| || | ||| || | || | || Sbjct 147499587 CCTGGTGGCCGAACTGGTTGCAGGGGAAGGCGAGCACGACGAACCCTCGGGGCCCGAAGC 147499646 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 ||||||| ||||| | ||| ||| | |||||| | ||| | ||||||||||| || | Sbjct 147499647 GCCGCTGGAGCTCCGAGAACTGCGTGAAGTCCCGGGCGGTGGTGCCTCAGAGGGAGGCCA 147499706 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTC 83562 |||| || |||| ||||| ||| ||| |||| ||| ||| || || Sbjct 147499707 CGTTAGAGACCAGCACCACCCGCCCCGCGAAGGAGCCCAAGTCCACGGGGTC 147499758 >seq1 Length=263920458 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/144 (74%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447 || |||||| || |||||||| || ||||| || || || |||| || ||||| | Sbjct 93744202 TTACCTGGTAGCCAAACTGGTTGCAAGGGAAACCCAGGACAACCAACCGCCGAGGATATT 93744143 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 || | || |||| ||||||||| ||||| |||| ||||| | ||||||||||| | Sbjct 93744142 TGCTCTGCAGCAG---GTTCATCTGGGTGTAGTCCCTCACCGTCGTGCCTCAGAGGGAGG 93744086 Query 83508 CTACGTTCTCGATGAGCAAGACCC 83531 | |||||||| || || | |||| Sbjct 93744085 CCACGTTCTCAATCAGGACCACCC 93744062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608747662488280