Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 1e-12 seq4 84.2 4e-11 >seq1 Length=263920458 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 ||||| | | || |||||||||||||| ||||||||||||||| ||| | || ||||| Sbjct 148006144 GGAACGAGTAGTAGCCTTTGCTGCAGTAGAAGGAATCTTCTTTTCCGGTTCTTTTGCATC 148006085 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 || || ||| | || || | ||| | ||||||| ||||| | ||||||||| Sbjct 148006084 TATATTTTGGTTGAAAAAGCGAGGTCTGATGCCTGGACTCACTTTCTCCAATGA 148006031 >seq4 Length=156502444 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| ||||| | ||||||||||||||||| |||||| || ||| | || || ||| Sbjct 14021116 GTTGCTTTTGCCTCGGTTGAAGGAATCTTCTTCTCTGGTGCCTTTGCAGCTATCTTTTGG 14021175 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 ||||||| || || | |||| |||||||| | ||||||||| Sbjct 14021176 CTCAAGAAAAGAGGACTGATGCCGGGTCTCACTTTCTCCAATGA 14021219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989502131406435