Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10]
6,457 sequences; 1,799,143,587 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq3801 120 3e-22
seq514 104 2e-17
seq14 104 2e-17
seq6 98.7 9e-16
>seq3801
Length=8881
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065
|||| || || | |||||||| | || | ||| |||||||| || |||||||| |||
Sbjct 3673 AGCCGCCCCGGAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 3732
Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125
| ||||| || || |||||||| || || |||| | | ||||||||| || |
Sbjct 3733 AAAGAGTGCGGCCATCTTCGAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGG 3792
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| ||||| ||||| ||||||| ||| | | ||| | || ||| ||| |||||
Sbjct 3793 GGATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCGA 3852
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || ||||| || || || || |||||||||||
Sbjct 3853 CTTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 3901
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
|||||||| | ||| | || ||||| || || ||||||||||| | |||||
Sbjct 5283 CGCAGCACAAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCTGAGAGAGTGCGGCCA 5342
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
|| || ||||| ||||| ||| |||| || | ||||||||| || ||||| |||||||||
Sbjct 5343 TCTTCAAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTG 5402
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| ||| || ||||| | || | ||| ||| | | || | || | ||| | |
Sbjct 5403 TCTTGGATCTTGGCCTTGACGTTTTCAATAGTGTCGCTTGGTTCAACCTCCAGGGTGATG 5462
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || || | ||||| ||||||||||||||
Sbjct 5463 GTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 5497
Score = 98.7 bits (108), Expect = 9e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || | |||||||||||| | || | ||| ||||| || || ||||| |||||
Sbjct 5042 GCCTCCCCTCAAACGCAGCACAAGGTGGAGGGTTGACTCTTTCTGGATGTTATAATCTGA 5101
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || || || || ||||| || ||| | || || | ||||||||| || ||
Sbjct 5102 CAGAGTACGGCCATCTTCAAGTTGCTTCCCGGCGAAAATCAACCTCTGCTGGTCTGGGGG 5161
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || |||||||| ||| || ||||| | || | ||| || ||| || |
Sbjct 5162 GATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATAGTGTCACTGGGTTCCAC 5221
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
|| | |||| |||||| || || || || || || || ||||||||| ||
Sbjct 5222 CTCTAGAGTAATGGTTTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGCCT 5273
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || | ||| | || || || || || || ||||| |||
Sbjct 3903 CCTCCCCGGAGACGAAGTACAAGATGGAGAGTGGATTCTTTCTGGATATTGTAGTCGGAG 3962
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || |||||||| || ||| | || || | ||||||||| |||||
Sbjct 3963 AGAGTGCGGCCATCTTCAAGCTGCTTCCCGGCGAAAATCAATCTCTGCTGGTCTGGAGGA 4022
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||||||||| |||||| ||||| | ||| | || || | | |||||
Sbjct 4023 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTCGGCTCGACT 4082
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
|||| || | |||||| || || | ||||| || || ||||||||| ||
Sbjct 4083 TCGAGAGTGATGGTTTTTCCAGTCAAGGTTTTGACAAAGATCTGCATGCCT 4133
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096
||| ||||| || || || ||||| || | ||| || || || |||||||| ||
Sbjct 4616 GGTTGACTCTTTCTGGATATTGTAGTCTGAAAGGGTACGGCCATCTTCAAGCTGCTTCCC 4675
Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156
||| | || | | ||||| || |||||||| ||||||||||| ||||||| |||
Sbjct 4676 GGCGAAAATGAGCCTTTGCTGATCTGGAGGGATGCCTTCTTTGTCTTGGATTTTCGCCTT 4735
Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216
|| | ||| | || || ||| ||| | |||| || | |||||| || || | ||
Sbjct 4736 GACGTTCTCAATGGTGTCACTGGGCTCAACTTCGAGAGTGATGGTTTTTCCAGTCAAGGT 4795
Query 131217 TTTTACGAAAATCTGCATGACT 131238
|| ||||||||||||||| ||
Sbjct 4796 CTTCACGAAAATCTGCATGCCT 4817
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || | |||||||||||| | || | || ||||| || || |||||||| |||
Sbjct 5499 CCTCCCCTCAAACGCAGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAA 5558
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || ||||| ||||| ||| |||| || | ||||||||| || |||
Sbjct 5559 AGAGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGG 5618
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| ||| || ||||| | ||| | || || | | ||| |
Sbjct 5619 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACC 5678
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || | || || || || ||||||||
Sbjct 5679 TCTAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 5725
>seq514
Length=269024
Score = 104 bits (114), Expect = 2e-17
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727
|||| | |||||||||| ||| | ||||| || |||||||| ||||| || ||||| |
Sbjct 181440 TGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATGGTCCCCAGGTTCTGCTGGT 181381
Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787
| || ||||||||||| | ||| ||||||||||||||||| ||| ||||| ||| |
Sbjct 181380 TGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTACGGAGTGCCGGTCTCAGTCTGGG 181321
Query 145788 TCTCCACGAT 145797
||| | |||
Sbjct 181320 ACTCGATGAT 181311
>seq14
Length=14352415
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 131003 ATGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAAT 131062
|||| || || || | ||||||| || || | ||| ||||| || | |||||||| |
Sbjct 9651872 ATGATCCCCCACGGAGGTGCAGCACCAAGTGGAGGGTGGACTCTTTCTAGATGTTGTAGT 9651931
Query 131063 CGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCG 131122
| | ||| || ||||| |||||||| ||||| |||||| | |||||||||| |
Sbjct 9651932 CTGAGAGAGTGTGCCCATCCTCCAGCTGCTTCCCTGCAAAGATTAGATGCTGCTGGTCGG 9651991
Query 131123 GAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACT 131182
||||||| ||||||||||| |||||| ||||| | ||| || ||| ||| ||
Sbjct 9651992 GAGGGATCCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAGTGGTGTCGTTGGGCT 9652051
Query 131183 CGATGTCGACGGTAACGGTTTTACC 131207
| | || | ||| | |||||| ||
Sbjct 9652052 CCACCTCCAAGGTGATGGTTTTGCC 9652076
>seq6
Length=80741955
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131015 GCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC 131074
||| | ||| ||| || || | ||| ||| || || || ||||| || | |||
Sbjct 46145026 GCAGATGCAACACCAAGTGGAGGGTGGACGTTTTCTGGATATTGTAGTCTGAGAGAGTGT 46145085
Query 131075 GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTT 131134
|| |||||| ||||||| ||||| |||| | || || ||||| |||||||| ||||
Sbjct 46145086 GCCCGTCCTCCAGCTGCTAACCTGCAAAGATCAGACACTACTGGTTGGGAGGGATCCCTT 46145145
Query 131135 CTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGG 131194
||||||| |||||| ||||| | ||| || || || ||| ||| | ||| | |
Sbjct 46145146 CTTTGTCCTGGATTTTGGTCTTGATGTTCTCAACGGTGTCACTGGGCTCCACGTCCAACG 46145205
Query 131195 TAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| ||||| || || || || || || || ||||||||||
Sbjct 46145206 TACTTGTTTTGCCCGTCAGGGTCTTCACAAAGATCTGCATGA 46145247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471974702666880
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