Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq4 102 7e-17 >seq4 Length=156502444 Score = 102 bits (112), Expect = 7e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 || ||||||||||||| ||| |||||| || || |||||||||||||| || || ||| Sbjct 39524768 CCTGTAACATGAGCAATCATTGAAGTTAGCAGTGAGTAGCTGGCAATGTTGAAGGGTACT 39524709 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 || || ||||| ||||| || | |||||||| ||| || || || ||||| | | ||| Sbjct 39524708 CCTAATCCCATATCTCCAGAACGCTGATACAACTGGCAAGAGAGTTCACCATTTACAACA 39524649 Query 20360 TAAAATTGACA 20370 || || || || Sbjct 39524648 TAGAACTGGCA 39524638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441337175697880