Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1826 82.4 6e-11 >seq1826 Length=21048 Score = 82.4 bits (90), Expect = 6e-11 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 114389 |||||||| |||||||||||||||| |||||||||| ||| | | || | | |||||| Sbjct 1732 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGGGGGAGCGACCAAAGGAA 1791 Query 114390 CCAAAACTGATATATTGAGCCATTCG 114415 ||| ||||||| || ||||||||||| Sbjct 1792 CCATAACTGATTTAATGAGCCATTCG 1817 Score = 82.4 bits (90), Expect = 6e-11 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 115586 |||||||| |||||||||||||||| |||||||||| ||| | | || | | |||||| Sbjct 1732 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGGGGGAGCGACCAAAGGAA 1791 Query 115587 CCAAAACTGATATATTGAGCCATTCG 115612 ||| ||||||| || ||||||||||| Sbjct 1792 CCATAACTGATTTAATGAGCCATTCG 1817 Score = 82.4 bits (90), Expect = 6e-11 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 114389 |||||||| |||||||||||||||| |||||||||| ||| | | || | | |||||| Sbjct 9556 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGGGGGAGCGACCAAAGGAA 9615 Query 114390 CCAAAACTGATATATTGAGCCATTCG 114415 ||| ||||||| || ||||||||||| Sbjct 9616 CCATAACTGATTTAATGAGCCATTCG 9641 Score = 82.4 bits (90), Expect = 6e-11 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 115586 |||||||| |||||||||||||||| |||||||||| ||| | | || | | |||||| Sbjct 9556 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGGGGGAGCGACCAAAGGAA 9615 Query 115587 CCAAAACTGATATATTGAGCCATTCG 115612 ||| ||||||| || ||||||||||| Sbjct 9616 CCATAACTGATTTAATGAGCCATTCG 9641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397031153298514