Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3801 100 2e-16 >seq3801 Length=8881 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || ||||| || ||||||||||| |||| | | | ||||| | || Sbjct 5294 ATGGAGAGTGGACTCTTTCTGGATGTTGTAATCTGAGAGAGTGCGGCCATCTTCAAGCTG 5353 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 |||||| ||| | ||||| | ||| ||||| || || ||||| ||||| || || Sbjct 5354 TTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGGATCTT 5413 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || || |||| ||||| ||||| ||| || || | ||| ||||| || || || Sbjct 5414 GGCCTTGACGTTTTCAATAGTGTCGCTTGGTTCAACCTCCAGGGTGATGGTCTTGCCAGT 5473 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || ||||| || ||||| |||||| Sbjct 5474 CAAGGTTTTCACGAAAATCTGCATA 5498 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || ||||| || ||||| ||||| ||| | | | ||||| | ||| Sbjct 5067 TGGAGGGTTGACTCTTTCTGGATGTTATAATCTGACAGAGTACGGCCATCTTCAAGTTGC 5126 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | ||||| | ||| ||||| || || || || ||||| || ||| Sbjct 5127 TTCCCGGCGAAAATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTG 5186 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || |||| ||||| || || ||| || |||| ||||||||||| || ||| Sbjct 5187 GCCTTGACGTTTTCAATAGTGTCACTGGGTTCCACCTCTAGAGTAATGGTTTTGCCAGTC 5246 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || ||||| Sbjct 5247 AGGGTCTTCACAAAGATCTGCAT 5269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357363875148245