Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq514 113 7e-20 >seq514 Length=269024 Score = 113 bits (124), Expect = 7e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| | ||| |||| |||||| || || |||| Sbjct 193484 CCTGCTTCCATCCGTAGAAGTGCATGCTGGTCAGCTTGCCGTAGTTGGGCTCAGCAATGT 193425 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | |||||||| |||||||| ||||| ||||| | | | || || || ||||| || | | Sbjct 193424 GGATGTTCAGGGACTGGCTCTGGTCAATGAAGGCCCCTCGGTCCGCAGCCATCTTCAGCA 193365 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 |||||||| || |||||||||||||||||| Sbjct 193364 CCGTCTTCTGGGAGATCTCCCACACCGTCTTG 193333 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 |||||| ||||| || || |||| |||||| | | |||| | ||| | || || | | Sbjct 191145 CTGAAACTCTCCAGAAAGGACCCTCCGGGTGTAGATGTTGCTCGTGTAGGGCTCTATGGA 191086 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||||||||| | |||||||| ||| ||||||||||| || |||| || ||| Sbjct 191085 CTCGTTGTTGCCCAGGATCTGAGCCGTGGAAGCCGTGGGCATCGGGGCCACCAGGAGGCT 191026 Query 204316 GTTGCGCACACCGT 204329 ||| || || |||| Sbjct 191025 GTTCCGGACCCCGT 191012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795091021035920