Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3801 176 1e-38 seq8 154 3e-32 seq14 116 8e-21 seq6 105 1e-17 >seq3801 Length=8881 Score = 176 bits (194), Expect = 1e-38 Identities = 167/212 (79%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || |||||||| ||||| || |||||||| |||| ||||| | |||||||| Sbjct 3921 ACAAGATGGAGAGTGGATTCTTTCTGGATATTGTAGTCGGAGAGAGTGCGGCCATCTTCA 3980 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || | || || ||||||||||||||||||||||||||||| Sbjct 3981 AGCTGCTTCCCGGCGAAAATCAATCTCTGCTGGTCTGGAGGAATGCCTTCTTTGTCTTGG 4040 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 ||||| ||||||||||||||||||||| ||| || ||||| || || | || Sbjct 4041 ATTTTGGCCTTGACGTTCTCAATGGTGTC---ACTCGGCTCGACTTCGAGAGTGATGGTT 4097 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| ||||| || || | ||||| Sbjct 4098 TTTCCAGTCAAGGTTTTGACAAAGATCTGCAT 4129 Score = 176 bits (194), Expect = 1e-38 Identities = 174/224 (78%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| |||| |||||||| || || |||||||| || |||||||| || | ||| || Sbjct 4593 CTGAGCCTCAGGACAAGGTGGAGGGTTGACTCTTTCTGGATATTGTAGTCTGAAAGGGTA 4652 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || ||||| || || | ||| || |||||||| |||||| Sbjct 4653 CGGCCATCTTCAAGCTGCTTCCCGGCGAAAATGAGCCTTTGCTGATCTGGAGGGATGCCT 4712 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 ||||||||||| ||||| ||||||||||||||||||||| ||| || ||||| Sbjct 4713 TCTTTGTCTTGGATTTTCGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACTTCG 4769 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || ||||| ||||| || || ||||| | ||||| Sbjct 4770 AGAGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAAATCTGCAT 4813 Score = 167 bits (184), Expect = 5e-36 Identities = 166/214 (78%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||||||||||||||| || || ||||| |||| |||||| | |||||||| Sbjct 5517 ACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCA 5576 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| | | || |||||||| || ||||| ||||||||||| Sbjct 5577 AGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 5636 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 || || |||||| |||||||||||||| |||| ||||| || || || | ||| Sbjct 5637 ATCTTGGCCTTGACATTCTCAATGGTGTC---ACTTGGCTCCACCTCTAGAGTGATGGTC 5693 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || ||||| || || || || | ||||||| Sbjct 5694 TTGCCAGTCAAGGTCTTCACAAAGATCTGCATTT 5727 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || ||||| || |||||||||||||| || || |||||||| | ||||| Sbjct 5277 CTGAGCCGCAGCACAAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCTGAGAGAGTG 5336 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| ||||| || || |||||||| | | || |||||||| || |||||| Sbjct 5337 CGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATGCCT 5396 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 ||||||||||| || || ||||||||| ||||| ||||| ||| || || ||| Sbjct 5397 TCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATAGTGTCGCTTGGTTCAACCTCCAGG 5456 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || ||||| ||||| ||||| | ||||| Sbjct 5457 GTGATGGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 5497 Score = 152 bits (168), Expect = 1e-31 Identities = 169/224 (75%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || || | ||| || ||||| ||||| || |||||||| |||| ||||| Sbjct 4821 CTGAGCCGCAGCACTAAGTGGAGGGTGGATTCTTTCTGGATATTGTAGTCGGAGAGAGTA 4880 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || ||||| || | | ||| || ||||| || |||||| Sbjct 4881 CGGCCATCTTCAAGCTGCTTCCCGGCGAAAATCAACCTTTGCTGATCTGGGGGGATGCCT 4940 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 ||||||||||| || || ||||||||| ||||||||||| ||| |||||| || Sbjct 4941 TCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTC---ACTTGGTTCCACCTCT 4997 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || ||||| ||||| || || | ||||| Sbjct 4998 AGTGTGATGGTCTTGCCCGTCAAGGTTTTGACAAAAATCTGCAT 5041 Score = 143 bits (158), Expect = 6e-29 Identities = 121/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| |||||| | ||||||||| Sbjct 3693 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCG 3752 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || |||||||| || |||||||| |||||||| Sbjct 3753 AGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 3812 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 ||||| ||| ||||||||||||||||| Sbjct 3813 ATTTTCGCCTTCACGTTCTCAATGGTGTC 3841 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| |||||||| ||||| || || ||||| |||| ||||| | |||||||| ||||| Sbjct 4382 GTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCTTCAAGCTG 4441 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || || || | || ||||||||||| || ||||| ||||||||||| ||||| Sbjct 4442 TTTGCCGGCAAAAATCAATCTCTGTTGGTCTGGCGGGATGCCCTCTTTGTCTTGGATTTT 4501 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | || || |||||||||||||| ||||||||| || || | || ||||| || Sbjct 4502 TGCTTTCACATTCTCAATGGTGTCGCTTGGTTCCACTTCGAGAGTGATGGTTTTTCCAGT 4561 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || || || | |||||| Sbjct 4562 CAGGGTCTTCACAAAGATTTGCAT 4585 Score = 140 bits (154), Expect = 7e-28 Identities = 159/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| |||||||| || || || || || ||||| | ||||| | |||||||| Sbjct 4149 ACAAGGTGGAGAGTGGATTCCTTCTGGATGTTATAATCTGACAGAGTGCGGCCATCTTCA 4208 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || | | ||| || |||||||| ||||| ||||||||||| Sbjct 4209 AGCTGCTTCCCGGCGAAAATCAACCTTTGCTGATCTGGAGGGATGCCCTCTTTGTCTTGG 4268 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 ||||| ||| || |||||||||||||| ||| ||||||||| || || | ||| Sbjct 4269 ATTTTCGCCTTAACATTCTCAATGGTGTC---ACTTGGTTCCACTTCGAGAGTGATGGTC 4325 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || || || | ||||| Sbjct 4326 TTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 4357 Score = 127 bits (140), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || |||||||| || || || ||||| | ||||| | |||||||| Sbjct 5061 ACAAGGTGGAGGGTTGACTCTTTCTGGATGTTATAATCTGACAGAGTACGGCCATCTTCA 5120 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || ||||| || | | || |||||||| || ||||| ||||||||||| Sbjct 5121 AGTTGCTTCCCGGCGAAAATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 5180 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||||||||| ||||| ||||| ||| |||||| || || |||| || Sbjct 5181 ATCTTGGCCTTGACGTTTTCAATAGTGTC---ACTGGGTTCCACCTCTAGAGTAATGGTT 5237 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 5238 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 5269 >seq8 Length=3271537 Score = 154 bits (170), Expect = 3e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 || |||| |||||| ||||| | |||||||| || || |||||||| || | |||||| Sbjct 1336501 CTCAGTCGCAAAACCAGGTGCAAGGTGGACTCCTTCTGGATATTGTAGTCAGAAAGAGTG 1336442 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || || |||||| Sbjct 1336441 CGGCCATCTTCCAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCT 1336382 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 ||||| || || || || ||| || |||||||||||||| ||||| || ||| Sbjct 1336381 TCTTTCTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGG 1336322 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | ||||||||||||| || || || || || ||||||| Sbjct 1336321 GTGATGGTCTTTCCTGTCAGGGTCTTCACAAAAACCTGCATTT 1336279 >seq14 Length=14352415 Score = 116 bits (128), Expect = 8e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||||||||| | || ||||| || | ||||| |||||| || ||||| Sbjct 9651900 GTGGAGGGTGGACTCTTTCTAGATGTTGTAGTCTGAGAGAGTGTGCCCATCCTCCAGCTG 9651959 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| ||||| ||||| || | || ||||| ||||| || ||||||||||| || ||||| Sbjct 9651960 CTTCCCTGCAAAGATTAGATGCTGCTGGTCGGGAGGGATCCCTTCTTTGTCCTGGATTTT 9652019 Query 195057 TTGCTTGACGTTCTCAATGGTGTC 195080 |||||| |||||| ||||||| Sbjct 9652020 GGCCTTGACATTCTCAGTGGTGTC 9652043 >seq6 Length=80741955 Score = 105 bits (116), Expect = 1e-17 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| || |||||| ||| || |||||||| || | ||||| ||| || Sbjct 46145033 CAACACCAAGTGGAGGGTGGACGTTTTCTGGATATTGTAGTCTGAGAGAGTGTGCCCGTC 46145092 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || ||||||| |||||| ||||| || | | |||| ||||| || ||||||||||| Sbjct 46145093 CTCCAGCTGCTAACCTGCAAAGATCAGACACTACTGGTTGGGAGGGATCCCTTCTTTGTC 46145152 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || ||||| ||||| |||||||| |||||| Sbjct 46145153 CTGGATTTTGGTCTTGATGTTCTCAACGGTGTC 46145185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109389812240519