Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq514 132 9e-26 >seq514 Length=269024 Score = 132 bits (146), Expect = 9e-26 Identities = 120/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 |||| || ||||||||||||||||||||| ||||| ||||| || |||| ||||||| Sbjct 175478 ACCCGCTTCATGAAGAGGTCCGGGATCCAGAGCGCAAAGAAGAGGTCCCTGGCCCGCTGC 175419 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 |||||| ||| |||| ||| |||| |||| |||||||| |||||| |||||| ||| Sbjct 175418 TCCTCCTTCCCGGTGTTCTTCTTCAGGTCCAGGAACTCAAAGATGTCAAAGTGCCAAGGC 175359 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 || || |||| ||| | || || ||||||| Sbjct 175358 TCGAGGTAGATGGCAAAGGCCCCCGGTCGCT 175328 Score = 100 bits (110), Expect = 5e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 221730 CCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGG 221789 |||||||||| ||| |||| |||| | |||||| || |||||||||||||||||||||| Sbjct 181458 CCACCTCGTCATTGCTGGTGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATGG 181399 Query 221790 TCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGAC 221849 ||||||||| | || || ||| | ||| | ||| ||||||||||| | ||| Sbjct 181398 TCCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTACGGAG 181339 Query 221850 CGCCAGTCTC 221859 ||| ||||| Sbjct 181338 TGCCGGTCTC 181329 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATG 221182 || || || ||||| || || ||||||| ||| | ||| ||| | || || ||| Sbjct 191147 ACCTGAAACTCTCCAGAAAGGACCCTCCGGGTGTAGATGTTGCTCGTGTAGGGCTCTATG 191088 Query 221183 CTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGA 221242 |||||||||||||||||||||||||||| || |||||||| || |||||||| || Sbjct 191087 GACTCGTTGTTGCCCAGGATCTGAGCCGTGGAAGCCGTGGGCATCGGGGCCACCAGGAGG 191028 Query 221243 CTGTTGCG 221250 ||||| || Sbjct 191027 CTGTTCCG 191020 Score = 87.8 bits (96), Expect = 3e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGC 221424 || ||||| | ||||||||| ||| || | ||| || ||| | || || || || Sbjct 187554 CCCTCGTAGGTCTCGTAGGGTCCGCACTCCTTGGCGAGGTTGCA-GCTGGCCTCCAGCGC 187496 Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAA 221484 || | ||||||||||||||||||| || |||||| || ||||||||| ||| Sbjct 187495 GGCATAGTAGATGGTCTCAAAGATCTGCTGGTTGAGGAGCTGGGCCTCGGGGCTCTCGAA 187436 Query 221485 GGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCT 221544 ||| | |||| || ||| |||| ||||| ||||| || ||||| || ||||| | Sbjct 187435 GGGGAAGCGCATCAGGATGAAGGCGTCCGCCAGGCCCTGCACCCCGATCCCAATGGGACG 187376 Query 221545 GTGTCTCCTGTTGGA 221559 ||| | | ||||||| Sbjct 187375 GTGCCGCTTGTTGGA 187361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928769830614080