Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3801 107 3e-18 >seq3801 Length=8881 Score = 107 bits (118), Expect = 3e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || |||||||| | || | ||| || | ||||| ||||||||||| |||||| Sbjct 4404 ATGTTGTAGTCGGACAGAGTACGGCCATCTTCAAGCTGTTTGCCGGCAAAAATCAATCTC 4463 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || || || ||||| ||||| ||||| | ||| | ||| ||| || Sbjct 4464 TGTTGGTCTGGCGGGATGCCCTCTTTGTCTTGGATTTTTGCTTTCACATTCTCAATGGTG 4523 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||| | || ||||| ||||| || ||||| || || || || || ||||| |||||| Sbjct 4524 TCGCTTGGTTCCACTTCGAGAGTGATGGTTTTTCCAGTCAGGGTCTTCACAAAGATTTGC 4583 Query 193359 AT 193360 || Sbjct 4584 AT 4585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899581786644240