Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3801 100 6e-16 >seq3801 Length=8881 Score = 100 bits (110), Expect = 6e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378 ||||||| ||||| || | ||| | ||||| ||| || || || || | || || Sbjct 4368 AGACGTAGCACTAAGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGG 4427 Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438 |||| || | ||||| || ||||| || ||||||||||| || || || || || ||| Sbjct 4428 CCATCTTCAAGCTGTTTGCCGGCAAAAATCAATCTCTGTTGGTCTGGCGGGATGCCCTCT 4487 Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498 || ||||| ||||| ||| ||||| || | || | ||| ||||| ||||| Sbjct 4488 TTGTCTTGGATTTTTGCTTTCACATTCTCAATGGTGTCGCTTGGTTCCACTTCGAGAGTG 4547 Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||||||| ||||| | || || | ||| || ||||| Sbjct 4548 ATGGTTTTTCCAGTCAGGGTCTTCACAAAGATTTGCAT 4585 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 192345 CTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAA 192404 |||||| ||| |||||||| || | || || |||| || | ||| || || || || Sbjct 5078 CTCTTTCTGGATGTTATAATCTGACAGAGTACGGCCATCTTCAAGTTGCTTCCCGGCGAA 5137 Query 192405 GATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 192464 || || ||||| || || || || || || ||||| ||||| || || || || || Sbjct 5138 AATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTT 5197 Query 192465 AGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 192524 |||| || | ||| || ||||||||||||||||| ||||| | || || | Sbjct 5198 TTCAATAGTGTCACTGGGTTCCACCTCTAGAGTAATGGTTTTGCCAGTCAGGGTCTTCAC 5257 Query 192525 AAATATCTGCAT 192536 ||| |||||||| Sbjct 5258 AAAGATCTGCAT 5269 Score = 84.2 bits (92), Expect = 4e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || || | ||| | || | || | ||| | |||||| ||| || || || Sbjct 5496 ATACCTCCCCTCAAACGCAGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCG 5555 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | ||||| || || ||||| || ||||| || || || Sbjct 5556 GAAAGAGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGG 5615 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| || || || ||||| || | || | || Sbjct 5616 GGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTTGGCTCC 5675 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540 || |||||||| ||||| || ||||| || || || | ||| |||||||||||| Sbjct 5676 ACCTCTAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATTTTA 5729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984398553661950