Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq481 111 5e-19 >seq481 Length=328561 Score = 111 bits (122), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 ||||||| | ||||| |||||||||||||| || || | || || ||||| ||||| Sbjct 105508 ACCAGTTTCTGCAGTTTTCACAGCTGTATCAATCAGCCCCTCTCGGCCTCCCATGGCATG 105567 Query 302667 GAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGC 302724 |||||| | |||| | |||| || || | | | | ||| |||| || || || | Sbjct 105568 GAAGAAGAACTCTGTTGGGGTC--AGGCCGGCCAGATACGAGTTCTCCACAAAGCCCCTG 105625 Query 302725 GCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTAT 302784 ||||| || |||| |||| | ||||| ||||| |||| || || |||| || Sbjct 105626 CTTTCGGGACCATAGTCGTCCTTGATGAAGTGAGGCAGCGTCCGGTGCTTGAAGCCAAAT 105685 Query 302785 GGGATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818 ||||| ||||| || |||||||||||||| |||| Sbjct 105686 GGGATGCGCTTCCCTTCAACGTTCTGCTGCCCCA 105719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471695836070009