Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10]
6,457 sequences; 1,799,143,587 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq3801 145 7e-30
seq6 104 2e-17
seq14 91.5 1e-13
seq8 91.5 1e-13
>seq3801
Length=8881
Score = 145 bits (160), Expect = 7e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || |||||||| ||| | |
Sbjct 4357 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTGGAACCAAGT 4298
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | ||| | ||| |||||||||||||| || || ||||| |||||
Sbjct 4297 GACACCATTGAGAATGTTAAGGCGAAA-ATCCAAGACAAAGAGGGCATCCCTCCAGATCA 4239
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||| || |||||||| ||||| || ||| | | |||||||||||||
Sbjct 4238 GCAAAGGTTGATTTTCGCCGGGAAGCAGCTTGAAGATGGCCGCACTCTGTCAGATTATAA 4179
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| || |||||||| || || ||| | || |||| ||| | ||||||
Sbjct 4178 CATCCAGAAGGAATCCACTCTCCACCTTGTCCTGCGTTTGAGGGGAGGC 4130
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || || || ||||| || || |||||||| ||| | | |
Sbjct 4585 ATGCAAATCTTTGTGAAGACCCTGACTGGAAAAACCATCACTCTCGAAGTGGAACCAAGC 4526
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||| |||||||||||||| || || || || || |||
Sbjct 4525 GACACCATTGAGAATGTGAAAGCAAAAATCCAAGACAAAGAGGGCATCCCGCCAGACCAA 4466
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| |||||||| |||||||| || ||| | | |||| || || |||
Sbjct 4465 CAGAGATTGATTTTTGCCGGCAAACAGCTTGAAGATGGCCGTACTCTGTCCGACTACAAC 4406
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || ||||| || || ||||| ||| | || | || ||||||
Sbjct 4405 ATCCAGAAAGAATCCACTCTCCACTTAGTGCTACGTCTCCGGGGAGGC 4358
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || ||||| ||||| || || || ||| |||
Sbjct 5269 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAAACCATTACTCTAGAGGTGGAACCCAGT 5210
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || ||||||||||||||||| || || || || || ||
Sbjct 5209 GACACTATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 5150
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| || |||||||| || || || ||| | | ||||||||||||||
Sbjct 5149 CAGAGGTTGATTTTCGCCGGGAAGCAACTTGAAGATGGCCGTACTCTGTCAGATTATAAC 5090
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || || || || || ||| | ||| |||| ||| | ||||||
Sbjct 5089 ATCCAGAAAGAGTCAACCCTCCACCTTGTGCTGCGTTTGAGGGGAGGC 5042
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | || || || ||||| || || || || |||||||| || |||
Sbjct 3902 GATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGCCCAG 3843
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|||||| | || |||| || | ||| ||||||||||| ||||| || || || || |
Sbjct 3842 CGACACCATTGAGAACGTGAAGGCGAAA-ATCCAAGACAAGGAAGGCATCCCCCCAGACC 3784
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || | | |||||||||||||| ||||| || ||| | | | || || || |
Sbjct 3783 AGCAGAGGCTCATCTTTGCCGGGAAGCAGCTCGAAGATGGCCGCACTCTTTCCGACTACA 3724
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|||| || ||||| || || || ||| ||||| |||| | || || |||
Sbjct 3723 ACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGCGCCTCCGGGGCGGC 3674
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| | || || || || || || || || || ||| | |
Sbjct 5041 ATGCAGATTTTTGTCAAAACCTTGACGGGCAAGACCATCACACTAGAGGTGGAACCAAGT 4982
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || |||||||||||||||||||| || || || |||||
Sbjct 4981 GACACCATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAG 4922
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||| || |||||||| ||||| || ||| | | | || || || ||
Sbjct 4921 CAAAGGTTGATTTTCGCCGGGAAGCAGCTTGAAGATGGCCGTACTCTCTCCGACTACAAT 4862
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || ||||| || || ||||| ||| |||| | | ||||||
Sbjct 4861 ATCCAGAAAGAATCCACCCTCCACTTAGTGCTGCGGCTCAGGGGAGGC 4814
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| | || || || || || || || || || ||| | | |
Sbjct 5497 ATGCAGATTTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTGGAGGTTGAACCAAGC 5438
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || |||||||||||||||||||| || || || || ||
Sbjct 5437 GACACTATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 5378
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| ||||| |||||||| || ||| | | | |||||||| |||
Sbjct 5377 CAGAGGTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACTCTCTCAGATTACAAC 5318
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || || || || || || | ||| |||| | | ||||||
Sbjct 5317 ATCCAGAAAGAGTCCACTCTCCATCTTGTGCTGCGGCTCAGGGGAGGC 5270
Score = 100 bits (110), Expect = 3e-16
Identities = 118/157 (75%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| | || || ||||| || || |||||||| || | |
Sbjct 4129 ATGCAGATCTTTGTCAAAACCTTGACTGGAAAAACCATCACTCTCGAAGTCGAGCCGAGT 4070
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| ||||||||||||||||| || ||||| || ||
Sbjct 4069 GACACCATTGAGAACGTCAAGGCCAAA-ATCCAAGACAAAGAAGGCATTCCTCCAGACCA 4011
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
|| | ||||| || |||||||| ||||| || |||
Sbjct 4010 GCAGAGATTGATTTTCGCCGGGAAGCAGCTTGAAGAT 3974
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | || || ||||| || || |||||||| || |||
Sbjct 4813 ATGCAGATTTTCGTGAAGACCTTGACTGGAAAAACCATCACTCTCGAAGTTGAGCCCAGT 4754
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| ||||||||||||||||| || ||||| |||||
Sbjct 4753 GACACCATTGAGAACGTCAAGGCGAAA-ATCCAAGACAAAGAAGGCATCCCTCCAGATCA 4695
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | | || || |||||||| ||||| || ||| | | | | ||||| || ||
Sbjct 4694 GCAAAGGCTCATTTTCGCCGGGAAGCAGCTTGAAGATGGCCGTACCCTTTCAGACTACAA 4635
Query 24883 CATTCAAAAGGAATCGACACTACAC 24907
|| || || || || || || |||
Sbjct 4634 TATCCAGAAAGAGTCAACCCTCCAC 4610
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || || || || || | |
Sbjct 5725 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTAGAGGTGGAGCCAAGT 5666
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||| || || || || || ||
Sbjct 5665 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 5606
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| ||||| |||||||| || ||| | | | || || || |||
Sbjct 5605 CAGAGGTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACTCTTTCCGACTACAAC 5546
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || || || || || || ||| | ||| |||| ||| | |||||
Sbjct 5545 ATCCAGAAAGAGTCCACTCTTCACCTTGTGCTGCGTTTGAGGGGAGG 5499
>seq6
Length=80741955
Score = 104 bits (114), Expect = 2e-17
Identities = 157/217 (72%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || ||||| | |||| | || || || |||
Sbjct 46145245 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAAACAAGTACGTTGGACGTGGAGCCCAGT 46145186
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || || ||| || || ||| ||||| ||||||||||| || |||||| | ||
Sbjct 46145185 GACACCGTTGAGAACATCAAGACCAAA-ATCCAGGACAAAGAAGGGATCCCTCCCAACCA 46145127
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG-AAAC-ATGTCAGATTAT 24880
| || |||||||||| || | ||||||||||| || | | || | ||||| ||
Sbjct 46145126 GTAGTGTCTGATCTTTGCAGGTTAGCAGCTGGAGGA--CGGGCACACTCTCTCAGACTAC 46145069
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGC 24917
|| || || || || || || |||||||||||||
Sbjct 46145068 AATATCCAGAAAACGTCCACCCTCCACTTGGTGTTGC 46145032
>seq14
Length=14352415
Score = 91.5 bits (100), Expect = 1e-13
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|| ||||| ||||||||||| || |||||||| || || | | | |||||||| |||||
Sbjct 9652019 AAAATCCAGGACAAAGAAGGGATCCCTCCCGACCAGCAGCATCTAATCTTTGCAGGGAAG 9651960
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|||||||||||| | | | ||||| || ||||| | || || || || || |||
Sbjct 9651959 CAGCTGGAGGATGGGCACACTCTCTCAGACTACAACATCTAGAAAGAGTCCACCCTCCAC 9651900
Query 24908 TTGGTGTTGC 24917
|||||| |||
Sbjct 9651899 TTGGTGCTGC 9651890
>seq8
Length=3271537
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||| | ||| | || || || || || || || || || || || || || ||| |
Sbjct 1336281 ATGCAGGTTTTTGTGAAGACCCTGACAGGAAAGACCATCACCCTGGAGGTGGAGCCCAGC 1336340
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || |||||||| || || || || ||
Sbjct 1336341 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGAGAAAGAAGGCATCCCGCCTGACCAG 1336400
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||||||||| |||||||| ||| | | | || || || ||
Sbjct 1336401 CAGAGGCTCATCTTTGCCGGGAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAT 1336460
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || | ||| |||| |||||| || | || |||
Sbjct 1336461 ATCCAGAAGGAGTCCACCTTGCACCTGGTTTTGCGACTGAGGGGTGGC 1336508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449861287639960
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