Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 7e-11 >seq1 Length=263920458 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| |||||||| | ||| |||||| | ||| |||| || ||| |||| ||||| Sbjct 147558488 AGCATATGGGGGCCGACCTGTGATGGCCTGGATCGCATCGTGGAGCTTTGTGCCATGCCA 147558547 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||| | || || || || ||| | | |||||||||||||| || |||| || | | || Sbjct 147558548 GAGTTGCAGGTCGGAGATTGGATGCTGTTTGAAAACATGGGGGCCTACA-CTGTGGCTGC 147558606 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 | || ||||| || || |||| | |||| || ||||||| || ||| Sbjct 147558607 GGCATCGACCTTCAATGGATTCCAGAGGCCAACAATCTACTATGTGATGTCA 147558658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463508186075760