Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1 141 2e-28 >seq1 Length=263920458 Score = 141 bits (156), Expect = 2e-28 Identities = 136/172 (79%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| | || ||||||||||| | | |||| ||||| || || ||| | |||||||| Sbjct 199395186 GATAGCTGGGGCTTTATGGTGGTATTTTGTATCAAAAGGAATTGAGTACCTGGATACAGT 199395245 Query 58429 GTTTTTCATACTTAGGAAA-AAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATT 58487 ||||||||| |||| |||| || ||||| || | || |||||||| || || ||||||| Sbjct 199395246 GTTTTTCAT-CTTAAGAAAGAAATTTAACCAAATCAGTTTTCTACATGTCTACCATCATT 199395304 Query 58488 TTACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || |||||||||||| | ||| | || || |||||| |||||||||| || Sbjct 199395305 ACACCATGTTTACTTTATGGTGGATCGGCATAAAATGGGTTGCAGGAGGACA 199395356 Score = 104 bits (114), Expect = 4e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 58673 CAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTTTCCA 58732 |||||||| ||| | | || || || || ||||| ||||| || ||||| || || || Sbjct 199401832 CAATTCCACATAACGCTTGGTCACACGGCCATGTCTATTTATATTGATTGTCCCTTCCCT 199401891 Query 58733 AAATGGACGCAATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGGTAAC 58792 ||||||| ||| ||| || || ||||| |||| ||||| || | ||||||||||| Sbjct 199401892 AAATGGATGCACTGGGGTGTCATTTTCTATGCTATCACTTTCATTGTTCTGTTTGGTAAC 199401951 Query 58793 TTCTATTTTAGAACATACAAGA 58814 ||||||| | | |||||||||| Sbjct 199401952 TTCTATTATCGGACATACAAGA 199401973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903338283423520