Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3801 109 5e-19 seq514 104 2e-17 >seq3801 Length=8881 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || |||||||||||| || ||||| |||||| |||||||| |||| | Sbjct 4392 GATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCTTCAAGCTGTTTGCCGGCA 4451 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || | | |||||| ||||| || ||||| ||||| || |||||| ||||| Sbjct 4452 AAAATCAATCTCTGTTGGTCTGGCGGGATGCCCTCTTTGTCTTGGATTTTTGCTTTCACA 4511 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | || |||||||||| || | ||||| |||||||| || || Sbjct 4512 TTCTCAATGGTGTCGCTTGGTTCCACTTCGAGAGTGATGGTTTTTCCAGTCAGGGTCTTC 4571 Query 132110 ATGAAAATCTGCATGACT 132127 | || || |||||| || Sbjct 4572 ACAAAGATTTGCATGCCT 4589 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||||||||| || || |||||||| | |||||| |||||| ||||| || |||| Sbjct 4618 TTGACTCTTTCTGGATATTGTAGTCTGAAAGGGTACGGCCATCTTCAAGCTGCTTCCCGG 4677 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | || || | || ||||||||||| ||||||||||| || ||||| || | Sbjct 4678 CGAAAATGAGCCTTTGCTGATCTGGAGGGATGCCTTCTTTGTCTTGGATTTTCGCCTTGA 4737 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | || || | ||||| ||||||| || | ||||| ||||||| || | Sbjct 4738 CGTTCTCAATGGTGTCACTGGGCTCAACTTCGAGAGTGATGGTTTTTCCAGTCAAGGTCT 4797 Query 132108 TTATGAAAATCTGCATGACT 132127 | | ||||||||||||| || Sbjct 4798 TCACGAAAATCTGCATGCCT 4817 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131908 GCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGA 131967 ||||| |||| || | | | ||||| || || |||||||||||| | || || Sbjct 3686 GCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCC 3745 Query 131968 ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTT 132027 |||||||||||| || |||| | |||| || | ||| || ||||| || |||||||| || Sbjct 3746 ATCTTCGAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTT 3805 Query 132028 ATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAG 132087 || ||||| |||| | || | || ||| | ||||| ||||||| || | Sbjct 3806 GTCTTGGATTTTCGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCGACTTCGAGAGTGAT 3865 Query 132088 CGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || || || || | ||||||||||| Sbjct 3866 GGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 3901 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || || ||||||||| | || || |||||| ||||| || |||| Sbjct 3936 GATTCTTTCTGGATATTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTCCCGGCG 3995 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || | | ||| || |||||||| ||||||||||| || ||||| || | Sbjct 3996 AAAATCAATCTCTGCTGGTCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCCTTGACG 4055 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || ||||||| ||||||| || | ||||| ||||||| ||||| Sbjct 4056 TTCTCAATGGTGTCACTCGGCTCGACTTCGAGAGTGATGGTTTTTCCAGTCAAGGTTTTG 4115 Query 132110 ATGAAAATCTGCATGACT 132127 | || ||||||||| || Sbjct 4116 ACAAAGATCTGCATGCCT 4133 >seq514 Length=269024 Score = 104 bits (114), Expect = 2e-17 Identities = 90/112 (80%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562 |||||| |||||| |||| ||| ||||||||||| || ||| |||| || ||||| | Sbjct 181440 TGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATGGTCCCCAGGTTCTGCTGGT 181381 Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 147614 |||| |||| ||||| | ||||||| ||||||||||||| ||||||||| Sbjct 181380 TGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTACGGAGTGCCGGTCTC 181329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476572731518520