Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq287 100 9e-18 seq221 98.7 3e-17 seq8 98.7 3e-17 seq3 98.7 3e-17 >seq287 Length=650225 Score = 100 bits (110), Expect = 9e-18 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 2759 TGTGTT-TATGGCTG---AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGG 2814 |||||| |||||| | || |||||||||||||||||| |||||||||||||||||||| Sbjct 315831 TGTGTTGTATGGCAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGG 315890 Query 2815 TCCCTGGTTCAACCCCGGGCTTCAGC 2840 |||||||||| | |||||| ||| || Sbjct 315891 TCCCTGGTTCGATCCCGGGTTTCGGC 315916 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 283278 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 283219 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 283218 CCGGGTTTCGGC 283207 >seq221 Length=1009300 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 355065 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 355006 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 355005 CCGGGTTTCGGC 354994 >seq8 Length=3271537 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1331842 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1331901 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1331902 CCGGGTTTCGGC 1331913 >seq3 Length=204416410 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 84756409 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 84756350 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 84756349 CCGGGTTTCGGC 84756338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848480646765