Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq3801 86.0 5e-12 >seq3801 Length=8881 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| ||||| || ||||| ||||||||||||||||| ||| |||| ||||| || Sbjct 5497 ATGCAGATTTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTGGAGGTTGAACCAAGC 5438 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | || || || || |||||||||||| | ||| || || Sbjct 5437 GACACTATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 5378 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||| | || | || |||||||| | |||||| ||| | ||||||||| Sbjct 5377 CAGAGGTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACTCTCTCAGATTACAAC 5318 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| || || || ||| | || || || | | ||||| Sbjct 5317 ATCCAGAAAGAGTCCACTCTCCATCTTGTGCTGCGGCTCAGGGGAGG 5271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402297938797856