Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3801 104 2e-17 seq8 102 7e-17 >seq3801 Length=8881 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || || ||||| || || || || Sbjct 5306 CTCTTTCTGGATGTTGTAATCTGAGAGAGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAA 5365 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | || | || || ||||| |||||| ||| | | Sbjct 5366 GATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTT 5425 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||||| | ||| ||||||| ||||| || || || ||||| |||||||| Sbjct 5426 TTCAATAGTGTCGCTTGGTTCAACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTTTTCAC 5485 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 5486 GAAAATCTGCAT 5497 >seq8 Length=3271537 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||| |||| || || || |||||| || || ||||| || | | || || | || Sbjct 1336493 CAAAACCAGGTGCAAGGTGGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATC 1336434 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || ||||| || | || ||||||||| | || | || || || || Sbjct 1336433 TTCCAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCTTCTTTCTC 1336374 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | | | | |||||||| | |||||||||| ||||| || Sbjct 1336373 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 1336314 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || || |||| || |||||||| | ||||||| Sbjct 1336313 CTTTCCTGTCAGGGTCTTCACAAAAACCTGCATT 1336280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450757215321560