Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1 136 5e-27 >seq1 Length=263920458 Score = 136 bits (150), Expect = 5e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATT 32720 ||||| | || || |||| |||||| | || ||||| || || || || ||||| | Sbjct 199395187 ATAGCTGGGGCTTTATGGTGGTATTTTGTATCAAAAGGAATTGAGTACCTGGATACAGTG 199395246 Query 32721 TTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTT 32780 || ||||| | |||||||||||||||||| | || ||| | || || ||||| |||| Sbjct 199395247 TTTTTCATCTTAAGAAAGAAATTTAACCAAATCAGTTTTCTACATGTCTACCATCATTAC 199395306 Query 32781 ACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 ||||||||||||||| | ||||| || || |||||| ||||||||||||| Sbjct 199395307 ACCATGTTTACTTTATGGTGGATCGGCATAAAATGGGTTGCAGGAGGACA 199395356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603132115769680