Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq249 264 1e-65 >seq249 Length=841488 Score = 264 bits (292), Expect = 1e-65 Identities = 542/794 (68%), Gaps = 19/794 (2%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || |||||| || |||| ||||| |||||||| ||||| |||||| ||||| ||||| Sbjct 269396 CCGCTGAGCAAAGAGGAGGAAGAGTTCCCCATCGCGTACTCCATCGTGCTCCACGACAAG 269455 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 | |||||||| ||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct 269456 GTGGAGATGTTTGAGCGGCTGTTGAGGGCCATCTACGCCCCGCAGAACGTCTACTGCGTC 269515 Query 13791 CACGTGGACTCCAAGTC-CGGCGACGAGTTCATCCGGGGCGTCTCGG-CCATCGCCAGGT 13848 || || ||| ||||||| | || || | || | ||| |||| |||| | Sbjct 269516 CATGTAGACGCCAAGTCTCCGCAACCTTTGCA--AGAAGCGGTTCGGAGGATCGTGTCCT 269573 Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908 |||| ||||| ||||||| | || | | |||||||| | |||||||| Sbjct 269574 GCTTTGGGAACGTCTTCCTGGCCTCCAAGCAGGAGCGGGTGGTGTATGCCTCCTGGAACA 269633 Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGT 13968 | || || |||||||| | ||||||| |||||| | ||| ||||||||| | | Sbjct 269634 GGGTCCAAGCCGACCTGAACTGCATGGAGGACCTTCTCCGAAGCCCGGTCAAGTGGCGCT 269693 Query 13969 ACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGG 14028 |||| |||||| ||||||| ||| | || ||||||||||| ||||||||| | Sbjct 269694 ACCTCCTCAACACCTGCGGGACCGACCTGCCCATCAAGACCAACGCGGAGATCGTCCAAT 269753 Query 14029 CGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCC---AACCACA 14085 | ||||||| ||| ||| | |||| | ||||| | || | |||| | ||| Sbjct 269754 CCCTGAAGGTGCTGAACGGGAGGAACAACATGGAG---GCGGAGAAGCCCTCGGAGTACA 269810 Query 14086 AGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCG 14145 | || | || | ||||| ||| | | | || | | |||||| ||| Sbjct 269811 A--AGC-CGGCCGCTGGAAGTATCACCACGAAGTGACCGACTCC---GTGGTCCGGACCC 269864 Query 14146 GCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTG 14205 | | | ||| ||| || |||| || ||||| || | || ||||| ||| | | Sbjct 269865 AGACGGAGAAGAGCCCTCCTCCGCAAAGTTCTCCCATGTTCACAGGGAACGCCTACGTGG 269924 Query 14206 CGGTCACCCGGGAGTTCGTGGA-CTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATG 14264 | ||| ||||| ||||| | | || || || | ||| | |||| | | |||| Sbjct 269925 TGCTCAGCCGGGGCTTCGTCCAGCATC-TCTTCCAAGACCCGATGGTGAAGCGGTTCATC 269983 Query 14265 CACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATG 14324 | |||| | | ||||| ||||| |||||||||||| | |||||||| |||| | ||| Sbjct 269984 GAGTGGTCCAAAGACACCTACAGTCCCGACGAGCACATCTGGGCCACGCTGCATCGCATG 270043 Query 14325 TACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCC 14384 ||| ||| || ||| ||||| | || ||||| ||| |||||||| ||| Sbjct 270044 CCGGGGGTGCCAGGCGGGGTCCCCTTCAACAGCAAGTTTGACCTGACGGACATGAACGCC 270103 Query 14385 AAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTAC 14444 | | ||| | || |||||| |||| ||||||||| ||| || ||||||| |||| Sbjct 270104 ATCGCGAGGCTGGTGAAGTGGTCCTACACCGAGGGGGACGTCACCAAGGGGGCCCCGTAC 270163 Query 14445 CCGCCTTGCGACGG 14458 ||||||||| |||| Sbjct 270164 CCGCCTTGC-ACGG 270176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658686031512320