Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 6e-11 >seq4 Length=156502444 Score = 82.4 bits (90), Expect = 6e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 27211 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 27270 || || || ||||| ||||| | || || || ||||||||||| ||||| |||||||| Sbjct 39524768 CCTGTAACATGAGCAATCATTGAAGTTAGCAGTGAGTAGCTGGCAATGTTGAAGGGTACT 39524709 Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACG 27330 || | ||||| || || || | ||| || | ||| || ||||| || |||| || Sbjct 39524708 CCTAATCCCATATCTCCAGAACGCTGATACAACTGGCAAGAGAGTTCACCATTTACAACA 39524649 Query 27331 TAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 || ||||| || | || ||||| || || | ||||| Sbjct 39524648 TAGAACTGGCAGAGAGCATGGCAAGGGGGTAATGCCAT 39524611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369478121746367