Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 3e-11 >seq4 Length=156502444 Score = 82.4 bits (90), Expect = 3e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 ||||| || | || |||||| | || | ||| |||||||| | | ||| | || || Sbjct 39524611 ATGGCATTACCCCCTTGCCATGCTCTCTGCCAGTTCTATGTTGTAAATGGTGAACTCTCT 39524670 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 ||||| ||||||||||| |||| || ||| || || || || || |||||||||||| Sbjct 39524671 TGCCAGTTGTATCAGCGTTCTGGAGATATGGGATTAGGAGTACCCTTCAACATTGCCAGC 39524730 Query 52230 TATTCCTTGCTGACGCATCTGATTGCTC 52257 || || |||| || ||||||||| Sbjct 39524731 TACTCACTGCTAACTTCAATGATTGCTC 39524758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190081424032770