Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3801 158 3e-33 seq8 140 7e-28 seq287 89.7 1e-12 seq5 89.7 1e-12 seq2 89.7 1e-12 seq3 86.0 1e-11 seq1839 84.2 5e-11 seq14 84.2 5e-11 seq4 84.2 5e-11 >seq3801 Length=8881 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || |||||||| ||||| | ||| |||||| ||||| |||||||| | Sbjct 3903 CCTCCCCGGAGACGAAGTACAAGATGGAGAGTGGATTCTTTCTGGATATTGTAGTCGGAG 3962 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || |||||||| || ||||| | || ||||| ||| Sbjct 3963 AGAGTGCGGCCATCTTCAAGCTGCTTCCCGGCGAAAATCAATCTCTGCTGGTCTGGAGGA 4022 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || ||||||||||| || || || ||| | || || ||||| | |||||| Sbjct 4023 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTCGGCTCGACT 4082 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| || || || ||||| || || || || |||||||| Sbjct 4083 TCGAGAGTGATGGTTTTTCCAGTCAAGGTTTTGACAAAGATCTGCAT 4129 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || ||||| || ||||| || | ||| || || |||||||||||||| | | Sbjct 3675 CCGCCCCGGAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 3734 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || |||||||||||||| | | || ||||| || Sbjct 3735 AGAGTGCGGCCATCTTCGAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 3794 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||||||||| || || || ||| | || || ||||| | |||||| Sbjct 3795 ATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCGACT 3854 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| || || | ||||| || || |||||||| Sbjct 3855 TCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 3901 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| |||||||||||||| | || || |||||||| || || ||||| |||||||| Sbjct 4394 TTCTTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCTTCAAGCTGTTTGCCGGCAAA 4453 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | |||||||| ||| || ||||| ||||||||||| |||||||| || | Sbjct 4454 AATCAATCTCTGTTGGTCTGGCGGGATGCCCTCTTTGTCTTGGATTTTTGCTTTCACATT 4513 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| | ||| |||||||||||||| || || || |||| ||||| || Sbjct 4514 CTCAATGGTGTCGCTTGGTTCCACTTCGAGAGTGATGGTTTTTCCAGTCAGGGTCTTCAC 4573 Query 283088 GAATATCTGCAT 283099 || || ||||| Sbjct 4574 AAAGATTTGCAT 4585 Score = 152 bits (168), Expect = 1e-31 Identities = 150/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| |||||||||||||| | ||| ||||||||||| || || ||||| ||||| ||| Sbjct 5535 TCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAG 5594 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || ||||| || || ||||| |||||||||||||| || || || | Sbjct 5595 ATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTC 5654 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| | || || || |||||||| ||||| || ||||| ||||| || Sbjct 5655 TCAATGGTGTCACTTGGCTCCACCTCTAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACA 5714 Query 283089 AATATCTGCATTTT 283102 || ||||||||||| Sbjct 5715 AAGATCTGCATTTT 5728 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || || || || ||||| | ||| ||||| ||||||||||| || | || |||||| Sbjct 5280 AGCCGCAGCACAAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCTGAGAGAGTGCGG 5339 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || || ||||| ||||| |||||||| | || ||||| || || || || Sbjct 5340 CCATCTTCAAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCT 5399 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 |||||||||||||| || || ||| | || |||||||| | ||| || || || ||| Sbjct 5400 TTGTCTTGGATCTTGGCCTTGACGTTTTCAATAGTGTCGCTTGGTTCAACCTCCAGGGTG 5459 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || ||||| || || ||||| |||||||| Sbjct 5460 ATGGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 5497 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| ||||| |||||||| | || || |||||||| || || || |||||||| || Sbjct 4850 TTCTTTCTGGATATTGTAGTCGGAGAGAGTACGGCCATCTTCAAGCTGCTTCCCGGCGAA 4909 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||| || || || || || || |||||||||||||| || || ||| | Sbjct 4910 AATCAACCTTTGCTGATCTGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTT 4969 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| | ||| || || || ||||| ||||| |||||||| || || || Sbjct 4970 TTCAATGGTGTCACTTGGTTCCACCTCTAGTGTGATGGTCTTGCCCGTCAAGGTTTTGAC 5029 Query 283088 GAATATCTGCAT 283099 || |||||||| Sbjct 5030 AAAAATCTGCAT 5041 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||| |||||||| | ||| || |||||||| || || || |||||||| || Sbjct 4623 TCTTTCTGGATATTGTAGTCTGAAAGGGTACGGCCATCTTCAAGCTGCTTCCCGGCGAAA 4682 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | ||| || || || || || || ||||||||||| || || || ||| | Sbjct 4683 ATGAGCCTTTGCTGATCTGGAGGGATGCCTTCTTTGTCTTGGATTTTCGCCTTGACGTTC 4742 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| | || |||||||||||||| || || || ||||| ||||| ||| Sbjct 4743 TCAATGGTGTCACTGGGCTCAACTTCGAGAGTGATGGTTTTTCCAGTCAAGGTCTTCACG 4802 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 4803 AAAATCTGCAT 4813 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| |||||||| || || | || || |||||||| || ||||| |||||||| || Sbjct 5079 TCTTTCTGGATGTTATAATCTGACAGAGTACGGCCATCTTCAAGTTGCTTCCCGGCGAAA 5138 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || ||||| || || ||||| |||||||||||||| || || ||| | Sbjct 5139 ATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTT 5198 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || |||||||| | ||| || || ||||| || || || || |||| ||||| || Sbjct 5199 TCAATAGTGTCACTGGGTTCCACCTCTAGAGTAATGGTTTTGCCAGTCAGGGTCTTCACA 5258 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 5259 AAGATCTGCAT 5269 Score = 127 bits (140), Expect = 4e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 || || || || || | ||| ||| || |||||||| || || | || ||||||||| Sbjct 4143 CGCAGGACAAGGTGGAGAGTGGATTCCTTCTGGATGTTATAATCTGACAGAGTGCGGCCA 4202 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 || || || || |||||||| || ||||| | ||| || || || || ||||| ||| Sbjct 4203 TCTTCAAGCTGCTTCCCGGCGAAAATCAACCTTTGCTGATCTGGAGGGATGCCCTCTTTG 4262 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 |||||||| || || || || | || || ||||| | ||| |||||||||||||| Sbjct 4263 TCTTGGATTTTCGCCTTAACATTCTCAATGGTGTCACTTGGTTCCACTTCGAGAGTGATG 4322 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || | ||||| || || |||||||| Sbjct 4323 GTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 4357 >seq8 Length=3271537 Score = 140 bits (154), Expect = 7e-28 Identities = 175/239 (73%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || | ||||| || || ||| || || ||||| |||||||||| | Sbjct 1336507 CCACCCCTCAGTCGCAAAACCAGGTGCAAGGTGGACTCCTTCTGGATATTGTAGTCAGAA 1336448 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || |||||||||||||| | | || |||||| ||| Sbjct 1336447 AGAGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGCGGG 1336388 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || || || |||||||| || || || | || || ||||| | || || Sbjct 1336387 ATGCCTTCTTTCTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 1336328 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATACAA 283111 || || ||||| ||||| || |||| ||||| || || | |||||||||| | ||||| Sbjct 1336327 TCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTCACAAAAACCTGCATTTTC-TCTACAA 1336270 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 1332259 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 1332317 >seq287 Length=650225 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 252007 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 252065 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 270845 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 270787 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 278550 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 278492 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 289445 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 289503 >seq5 Length=150641573 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 29377287 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 29377345 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 30548151 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 30548093 >seq2 Length=199619895 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 197652730 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 197652672 >seq3 Length=204416410 Score = 86.0 bits (94), Expect = 1e-11 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 168752 ATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||| |||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 26360002 ATTTGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 26359943 >seq1839 Length=20760 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 168756 GTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 10441 GTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 10496 >seq14 Length=14352415 Score = 84.2 bits (92), Expect = 5e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 282869 TGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC 282928 ||| || ||||| ||| | || |||| || | ||| ||||| | |||||||||||| Sbjct 9651873 TGATCCCCCACGGAGGTGCAGCACCAAGTGGAGGGTGGACTCTTTCTAGATGTTGTAGTC 9651932 Query 282929 AGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACC 282988 | || ||| | |||||||| || || ||||| |||||||| | | | || ||||| Sbjct 9651933 TGAGAGAGTGTGCCCATCCTCCAGCTGCTTCCCTGCAAAGATTAGATGCTGCTGGTCGGG 9651992 Query 282989 CGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024 || || || || ||||| ||||| || || || || Sbjct 9651993 AGGGATCCCTTCTTTGTCCTGGATTTTGGCCTTGAC 9652028 >seq4 Length=156502444 Score = 84.2 bits (92), Expect = 5e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGAT 168812 |||||||||||| |||||||| ||||||||||| |||||||||| ||| |||||||||| Sbjct 142183658 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGATTCGATTCCCCGAT 142183600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046652602938878