Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq8 136 3e-27 seq3801 131 1e-25 seq6 116 3e-21 seq14 86.0 5e-12 >seq8 Length=3271537 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || ||||||| ||| |||||||| | ||| |||||| ||||| ||||| || Sbjct 1336510 ATGCCACCCCTCAGTCGCAAAACCAGGTGCAAGGTGGACTCCTTCTGGATATTGTAGTCA 1336451 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | || ||| | || ||||||||||||||||||||||| | | |||||| || | Sbjct 1336450 GAAAGAGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGC 1336391 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | ||||| || ||| ||||| ||||| | | ||||||||| || ||| Sbjct 1336390 GGGATGCCTTCTTTCTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCC 1336331 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || |||||||| || ||||||||||| || | ||||| Sbjct 1336330 ACCTCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTCACAAAAACCTGCAT 1336281 >seq3801 Length=8881 Score = 131 bits (144), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||||||| || ||| |||||| ||||||||||| |||| || ||| | || Sbjct 3689 CAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATC 3748 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||||||||||||||| | | |||||| |||| || | |||||||| || Sbjct 3749 TTCGAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTC 3808 Query 44245 CGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 || ||| |||| | |||| | ||||||||| || || || || | || || | Sbjct 3809 TTGGATTTTCGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCTCGACTTCGAGAGTGATGG 3867 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||||||||||||| || || ||||| Sbjct 3868 TCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 3901 Score = 116 bits (128), Expect = 3e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || |||| | || || ||||| || ||| ||||| |||||||| ||||| Sbjct 4127 CATGCCTCCCCTCAAACGCAGGACAAGGTGGAGAGTGGATTCCTTCTGGATGTTATAATC 4186 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || |||||||||||||| || ||||| | |||||||||| Sbjct 4187 TGACAGAGTGCGGCCATCTTCAAGCTGCTTCCCGGCGAAAATCAACCTTTGCTGATCTGG 4246 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || || || || || ||| || | || ||| | |||||||| | || Sbjct 4247 AGGGATGCCCTCTTTGTCTTGGATTTTC-GCCTTAACATTCTCAATGGTGTCACTTGGTT 4305 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || | || || ||||| || |||||||||||||| ||||| |||||| Sbjct 4306 CCACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 4358 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | || ||| || || || ||| ||| || |||||||||||||| Sbjct 5267 CATGCCTCCCCTGAGCCGCAGCACAAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATC 5326 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || ||||| || ||||| |||||||| | |||||| |||| Sbjct 5327 TGAGAGAGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGG 5386 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || || ||||| ||| | || | || |||||| | ||| Sbjct 5387 GGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATAGTGTCGCTTGGTTC 5446 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || ||||| || || | ||| |||||||| || ||||| Sbjct 5447 AACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 5497 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || |||| | || ||| |||||||| ||| ||| || ||||||||||| || Sbjct 5495 CATACCTCCCCTCAAACGCAGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTC 5554 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || || ||||| || ||||| |||||||| | |||||| |||| Sbjct 5555 GGAAAGAGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGG 5614 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || || ||||| ||| | | | |||||||| | || Sbjct 5615 GGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTTGGCTC 5674 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| | || || ||||| || || | ||||||||| ||||| ||||| Sbjct 5675 CACCTCTAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 5725 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || |||| | || ||| ||||| || || ||| || |||||||| ||||| Sbjct 5039 CATGCCTCCCCTCAAACGCAGCACAAGGTGGAGGGTTGACTCTTTCTGGATGTTATAATC 5098 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || || || ||||||||||| || ||||| | |||||| |||| Sbjct 5099 TGACAGAGTACGGCCATCTTCAAGTTGCTTCCCGGCGAAAATCAACCTCTGCTGGTCTGG 5158 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || || ||||| ||| | || | || ||||| || ||| Sbjct 5159 GGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATAGTGTCACTGGGTTC 5218 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||| | ||||| || || || || ||||||||||| ||||| |||||| Sbjct 5219 CACCTCTAGAGTAATGGTTTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 5270 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | || ||| | ||| || ||| || || ||||| ||||| || Sbjct 4811 CATGCCTCCCCTGAGCCGCAGCACTAAGTGGAGGGTGGATTCTTTCTGGATATTGTAGTC 4870 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| || | || || |||||||||||||| || ||||| | |||||||||| Sbjct 4871 GGAGAGAGTACGGCCATCTTCAAGCTGCTTCCCGGCGAAAATCAACCTTTGCTGATCTGG 4930 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || || ||||| ||| | || | |||||||| | ||| Sbjct 4931 GGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCACTTGGTTC 4990 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||| | || || ||||| ||||| | ||| || || || || |||||| Sbjct 4991 CACCTCTAGTGTGATGGTCTTGCCCGTCAAGGTTTTGACAAAAATCTGCATG 5042 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| | ||| || ||| || || ||||||||||| |||| || || | || || Sbjct 4376 CACTAAGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCTTC 4435 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||| || |||||||| ||||| | ||| || |||| || | || || || || Sbjct 4436 AAGCTGTTTGCCGGCAAAAATCAATCTCTGTTGGTCTGGCGGGATGCCCTCTTTGTCTTG 4495 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 || || ||||| | ||| | ||||||||| | |||||| || | || || || | Sbjct 4496 GATTTT-TGCTTTCACATTCTCAATGGTGTCGCTTGGTTCCACTTCGAGAGTGATGGTTT 4554 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || ||||||||||| |||||||||||| Sbjct 4555 TTCCAGTCAGGGTCTTCACAAAGATTTGCATG 4586 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || || || |||| || ||||| || || ||| || ||||| ||||| Sbjct 4580 TTGCATGCCTCCCCTGAGCCTCAGGACAAGGTGGAGGGTTGACTCTTTCTGGATATTGTA 4639 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | || || | || || |||||||||||||| || || | | |||||||| Sbjct 4640 GTCTGAAAGGGTACGGCCATCTTCAAGCTGCTTCCCGGCGAAAATGAGCCTTTGCTGATC 4699 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || ||| | ||||| || || || ||| || | | |||| | |||||||| || Sbjct 4700 TGGAGGGATGCCTTCTTTGTCTTGGATTTTC-GCCTTGACGTTCTCAATGGTGTCACTGG 4758 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || | || || || ||||| || | |||||||||||| || |||||| Sbjct 4759 GCTCAACTTCGAGAGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAAATCTGCATG 4814 >seq6 Length=80741955 Score = 116 bits (128), Expect = 3e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 |||||||| ||| || ||| | || ||||| ||||| || | ||| | || |||| Sbjct 46145033 CAACACCAAGTGGAGGGTGGACGTTTTCTGGATATTGTAGTCTGAGAGAGTGTGCCCGTC 46145092 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||||||||| || |||||||||| || || ||| | | ||| | ||||| || || Sbjct 46145093 CTCCAGCTGCTAACCTGCAAAGATCAGACACTACTGGTTGGGAGGGATCCCTTCTTTGTC 46145152 Query 44245 CGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 | || || ||| | ||||| | | |||||| || ||||| |||| |||| | | Sbjct 46145153 CTGGATTTTGGTCTTGA-TGTTCTCAACGGTGTCACTGGGCTCCACGTCCAACGTACTTG 46145211 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 | || ||||| ||||||||||| ||||| ||||||||| Sbjct 46145212 TTTTGCCCGTCAGGGTCTTCACAAAGATCTGCATGATG 46145249 >seq14 Length=14352415 Score = 86.0 bits (94), Expect = 5e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||| ||| || ||| ||| || | ||||||||| || | ||| | || | || Sbjct 9651891 CAGCACCAAGTGGAGGGTGGACTCTTTCTAGATGTTGTAGTCTGAGAGAGTGTGCCCATC 9651950 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||||||||||||| |||||||| | | ||||||| || | ||| | ||||| || || Sbjct 9651951 CTCCAGCTGCTTCCCTGCAAAGATTAGATGCTGCTGGTCGGGAGGGATCCCTTCTTTGTC 9652010 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | || || ||| | | | |||||||| || |||||||||| || || || Sbjct 9652011 CTGGATTTTGGCCTTGACATTCTCAGTGGTGTCGTTGGGCTCCACCTCCAAGGTGATGGT 9652070 Query 44305 CTTTCCC 44311 || ||| Sbjct 9652071 TTTGCCC 9652077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359962070667969