Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10]
6,457 sequences; 1,799,143,587 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq3801 161 2e-34
seq14 109 1e-18
>seq3801
Length=8881
Score = 161 bits (178), Expect = 2e-34
Identities = 169/220 (77%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| ||||||||||| || | || |||||||| ||||| ||||| || || || |||
Sbjct 4810 CAGATTTTCGTGAAGACCTTGACTGGAAAAACCATCACTCTCGAAGTTGA--GCCCAGTG 4753
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| || || || ||||||||||| |||||||| || ||||
Sbjct 4752 ACACCATTGAGAACGTCAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCAGATCAGC 4693
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
|| | || || |||||||| || ||||| |||||||| | || ||| | || || ||
Sbjct 4692 AAAGGCTCATTTTCGCCGGGAAGCAGCTTGAAGATGGCCGTACCCTTTCAGACTACAATA 4633
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| ||||| ||||| || || ||||| |||| |||||
Sbjct 4632 TCCAGAAAGAGTCAACCCTCCACCTTGTCCTGAGGCTCAG 4593
Score = 161 bits (178), Expect = 2e-34
Identities = 169/221 (76%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| |||||||||||||| | || || || || |||||||| ||||| ||| |||
Sbjct 5494 CAGATTTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTGGAGGTTGAACCAAGC--- 5438
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||| || || |||||||| ||||| || ||||||||||| ||||| || ||||||
Sbjct 5437 GACACTATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 5378
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| | | ||||||||||| |||||||| |||||||| | ||||| | ||||| |||
Sbjct 5377 CAGAGGTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACTCTCTCAGATTACAAC 5318
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| ||||| || || || |||||||| || | |||||
Sbjct 5317 ATCCAGAAAGAGTCCACTCTCCATCTTGTGCTGCGGCTCAG 5277
Score = 147 bits (162), Expect = 5e-30
Identities = 166/220 (75%), Gaps = 7/220 (3%)
Strand=Plus/Minus
Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971
|||||||||| | || || ||||| || | || || || || ||||| || ||||||
Sbjct 5731 GTTAAAATGC---AGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTAGAGGTG 5675
Query 177972 GAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029
|| || || ||||||| ||||| ||||| ||||| || |||||||| || ||||
Sbjct 5674 GA--GCCAAGTGACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCC 5617
Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089
| || |||||||| | | ||||||||||| |||||||| |||||||| | ||||||
Sbjct 5616 CCCCAGACCAGCAGAGGTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACTCTTT 5557
Query 178090 CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || ||| |||| ||||| || || || || |||||
Sbjct 5556 CCGACTACAACATCCAGAAAGAGTCCACTCTTCACCTTGT 5517
Score = 145 bits (160), Expect = 2e-29
Identities = 158/208 (76%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || || ||||| | || |||||||| ||||| ||||| || || || ||
Sbjct 4126 CAGATCTTTGTCAAAACCTTGACTGGAAAAACCATCACTCTCGAAGTCGA--GCCGAGTG 4069
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| || || || ||||||||||| || ||||| |||||||
Sbjct 4068 ACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGACCAGC 4009
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | || |||||||| || ||||| |||||||| | ||||| |||| || ||
Sbjct 4008 AGAGATTGATTTTCGCCGGGAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAATA 3949
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| |||||||| || || ||||||||
Sbjct 3948 TCCAGAAAGAATCCACTCTCCATCTTGT 3921
Score = 140 bits (154), Expect = 8e-28
Identities = 157/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| ||||| ||||| || ||||| || || || ||||| ||||| || || || |||
Sbjct 3898 CAGATTTTTGTGAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGA--GCCCAGCG 3841
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||| || || || || ||||| ||||| ||||| || |||||||
Sbjct 3840 ACACCATTGAGAACGTGAAGGCGAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAGC 3781
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| ||||| || |||||||||||||| | |||||| |||| || |||
Sbjct 3780 AGAGGCTCATCTTTGCCGGGAAGCAGCTCGAAGATGGCCGCACTCTTTCCGACTACAACA 3721
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || || ||
Sbjct 3720 TCCAGAAGGAGTCCACCCTCCACCTGGT 3693
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || ||||| | || || || || ||||| || ||||||||| |||
Sbjct 5038 CAGATTTTTGTCAAAACCTTGACGGGCAAGACCATCACACTAGAGGTGGAACCAAGTGAC 4979
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| || ||||||||||| ||||| || || ||||||
Sbjct 4978 ACCATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAA 4919
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || |||||||| || ||||| |||||||| | ||||| |||| || || ||
Sbjct 4918 AGGTTGATTTTCGCCGGGAAGCAGCTTGAAGATGGCCGTACTCTCTCCGACTACAATATC 4859
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| |||||||| || || || | || || | |||||
Sbjct 4858 CAGAAAGAATCCACCCTCCACTTAGTGCTGCGGCTCAG 4821
>seq14
Length=14352415
Score = 109 bits (120), Expect = 1e-18
Identities = 136/183 (74%), Gaps = 5/183 (3%)
Strand=Plus/Minus
Query 177948 GGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--GACACCATCGAGAACGTCAAACAAA 178005
|| ||||| |||||| | |||||||| || || ||||||| ||||| ||||| |
Sbjct 9652076 GGCAAAACCATCACCTTGGAGGTGGA--GCCCAACGACACCACTGAGAATGTCAAGGCCA 9652019
Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065
| || |||||||||||||| |||||||| |||||||| | || ||||| || || || |
Sbjct 9652018 AAATCCAGGACAAAGAAGGGATCCCTCCCGACCAGCAGCATCTAATCTTTGCAGGGAAGC 9651959
Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATC 178125
|||| || ||||| ||||| | || || ||| || | ||||| || || || || |
Sbjct 9651958 AGCTGGAGGATGGGCACACTCTCTCAGACTACAACATCTAGAAAGAGTCCACCCTCCA-C 9651900
Query 178126 TTG 178128
|||
Sbjct 9651899 TTG 9651897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203631614941658
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |