Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq283893 129 5e-25 >seq283893 Length=4807905 Score = 129 bits (142), Expect = 5e-25 Identities = 124/159 (78%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 20399 TAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGT 20458 ||||||||||||||||||| || || ||||| ||||| ||| ||| |||| ||| Sbjct 4300570 TAATGGCTTTGCCTCCATGCCACGCCCTTTGCCAGTTTTATGTTCTAAATGGTGAACTGT 4300511 Query 20459 CGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAA 20518 | || || ||||||| |||| | || |||||||| || || ||||||||||| || | Sbjct 4300510 CTTGCCAGTTGTATCAGAGATCTGGAGACATGGGACTAGGGGTGCCTTTCAATATCGCCA 4300451 Query 20519 GTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||||| | ||||| || ||||||||||| ||||| |||| Sbjct 4300450 GTTATTCACTGCTCACATATATGATTGCCCATGTCACAG 4300412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397789577935900