Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq283893 89.7 5e-13 >seq283893 Length=4807905 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| |||||| || | || ||||| ||||| || || ||||| Sbjct 4300408 AGGCCTGTGACATGGGCAATCATATATGTGAGCAGTGAATAACTGGCGATATTGAAAGGC 4300467 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || || | ||||||||||| || |||||||||| ||| || || || ||||| | Sbjct 4300468 ACCCCTAGTCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGA 4300527 Query 20357 ACATAAAATTGACA 20370 |||||||| || || Sbjct 4300528 ACATAAAACTGGCA 4300541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 439791471600800