Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq207829 105 1e-17 >seq207829 Length=4015 Score = 105 bits (116), Expect = 1e-17 Identities = 116/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || |||||| || | |||||| | ||||||| |||||| || || || | Sbjct 1339 CCTGCTTCCACCCATAGAAATGCATGCTGGTGAGTTTGCCATAGTTGGGCTCTGCAATAT 1280 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | |||||||| |||||||| || |||||||||| |||| | || || ||||| |||| | Sbjct 1279 GGATGTTCAGGGACTGGCTCTGATCGATGAAAG-CGCCTCTGTCAGCTGCCATTTTGAGA 1221 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||||||||| || || ||||| || ||||| Sbjct 1220 ATGGTCTTCTGGGAGATTTCCCAGACTGTCTT 1189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 792306357707200